Planococcus sp. Y42: B0X71_04520
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Entry
B0X71_04520 CDS
T04763
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03420
Nucleotide excision repair
pmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0X71_04520
03430 Mismatch repair
B0X71_04520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_04520
Enzymes [BR:
pmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0X71_04520
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0X71_04520
MMR (mismatch excision repair)
Other MMR factors
B0X71_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
AAA_22
ResIII
HHH_3
ADDB_N
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AQQ52445
UniProt:
A0A1Q2KW47
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All DBs
Position
899049..901268
Genome browser
AA seq
739 aa
AA seq
DB search
MNQLAKNLLNGMNPQQAEAVQYTEGPLLIMAGAGSGKTRVLTHRIAYLVLEKDVYPSHIL
AITFTNKAAREMRERIDGLLGHGSGQRMWVSTFHSMCVRILRRDIDRVGISKNFSILDGS
DQLTVIKNVLKELNMDPKKFDPRTMLNAISSAKNECISARQFKENLNALNPYEKAISDVY
TSYEKRLLKNQSLDFDDLIMTTLNLFEQVPEVLDFYQNKFQYIHVDEYQDTNNAQYRLVK
MLASKFKNICVVGDSDQSIYRWRGADIQNILSFEKDYPNAKAIMLEQNYRSTKTILQAAN
EVIKNNTSRYPKELRTDNADGQSITLFKAGNEREEAQFIVENIQNLMREDGYKPADFAIL
YRTNAQSRMMEEMLVKSNMSYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARVINE
PKRGIGGTSFEKIVRFSIDQDLTILDALNEVDFMGLTPKTAASAAEFRDMIQGFTQMQEY
LSVTELVEEVLVKSGYRQMLQADKTIEAESRLENIDEFLSVTRAFEEQNDDKSLIAFLTD
LALVADIDSLGNDGADESEGQIVLMTMHAAKGLEFPVVFIIGLEENVFPHSRSIHDEEEM
EEERRLCYVGITRAEQRLYLTHAASRTLFGRSSYNMPSRFLNEISEELMEPAGIQRPAFK
VAGRPATQKRAPVRKPVSAGSGSEKLNWQPGNKAQHKKWGTGTVVSVRGEGDQMELDIAF
PSPTGVKRLLAKFAPIEKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattggcgaagaacttgctgaacggcatgaacccgcagcaggcagaagcggtg
cagtatacggaagggccgcttctgatcatggcaggtgcaggatcaggcaaaacacgtgtg
cttacgcaccgcattgcatatcttgtgcttgaaaaagacgtttatccgtctcatattctg
gcaatcacatttacaaataaagccgcccgtgaaatgcgggagcggattgatggcttattg
ggtcatggcagcggacagcggatgtgggtatccaccttccactcgatgtgtgtgcgcatt
ctgcgccgggatatcgaccgggtggggatttcgaaaaacttctcgattctcgacggatcc
gatcagctgacggtgattaaaaacgtcctgaaagaactgaacatggatccgaagaaattc
gatccgcggacaatgctgaatgctatctcgtcagcaaaaaatgaatgcatcagtgcccgg
caattcaaggaaaacttgaatgcgctgaatccatacgaaaaagcgatttctgatgtgtac
acatcctatgaaaaacggctgctgaaaaaccagtcgctcgatttcgatgatctgatcatg
acgacacttaatcttttcgaacaagtaccggaagtgctcgatttctatcagaacaaattc
cagtatattcatgtcgacgaataccaggatacgaataacgcccaataccggctcgtgaag
atgcttgcgagcaaattcaagaacatttgcgtggtgggtgattcggaccagtcgatctat
cgctggcgcggcgcggatatccaaaatatcctgtcgttcgaaaaggattacccgaatgca
aaagcgatcatgcttgagcagaattaccggtcgacaaaaacgattctgcaggcagccaat
gaagtgatcaagaacaatacgagccgctacccgaaagaacttcggacagataatgcggac
ggccagtccatcactttattcaaagccgggaacgagcgcgaggaagcgcagttcatcgtt
gagaatatccagaacctgatgcgtgaagatggctacaaaccggctgattttgcgattctg
taccggacaaatgctcaatcccggatgatggaggaaatgcttgttaaatcgaatatgagc
tataccatcgtcggcggcacgaaattctatgatcgcaaagagatcaaggacctgctcgct
tatttgcgtctcatcgctaataacgacgatgatctttcgctggctcgggtcatcaatgaa
ccgaagcgggggatcggcggcacaagtttcgagaaaatcgtccggttttcaatcgatcag
gacctgacgatcttggatgcgctcaatgaagtcgatttcatggggctgacaccgaaaact
gccgcgtcagcagcggaattccgtgatatgattcagggattcacgcaaatgcaggagtac
ttatccgtaacagaattggtggaagaagtgctggtgaaatccggctaccggcagatgctg
caggcggataagacgatcgaagcggaaagccgccttgaaaatatcgatgaattcctgtct
gtgacccgcgcatttgaagaacagaacgacgataaatcactcattgccttcctgaccgac
ctcgcactcgttgccgatatcgattcactcggcaatgacggcgcagatgagtcggaaggc
caaatcgtcctcatgaccatgcatgcagcaaaaggactggagtttccagtcgtgttcatc
attggactcgaagaaaatgtcttcccgcactcccgctccattcacgatgaagaggaaatg
gaagaagaacggcgcttatgctatgtcgggattacgcgcgccgagcagaggctctatttg
acgcacgccgcctcccgcacgctgttcgggcgaagcagctataacatgccgtcccgcttc
ctgaacgaaatatcggaagagcttatggaaccggcaggaattcagcggccggcattcaaa
gtagcaggccggccggcaacgcagaagcgggcaccggtccgcaaaccggtttctgcgggt
tccggcagtgagaaactgaactggcagccaggaaacaaagcacagcataaaaaatggggc
accggcacggtcgtcagcgtacgaggtgaaggcgatcaaatggaactggatatcgcattc
ccaagcccgaccggtgtcaaacggcttcttgcgaaatttgcaccgattgaaaaagtctga
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