Planococcus sp. Y42: B0X71_04580
Help
Entry
B0X71_04580 CDS
T04763
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pmar
Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmar03009
]
B0X71_04580
Enzymes [BR:
pmar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B0X71_04580
Ribosome biogenesis [BR:
pmar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B0X71_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
PrmA
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_11
RrnaAD
TPMT
Methyltransf_32
Methyltransf_4
Methyltransf_12
N6_N4_Mtase
DOT1
Motif
Other DBs
NCBI-ProteinID:
AQQ52457
UniProt:
A0A1Q2KXA8
LinkDB
All DBs
Position
913608..914972
Genome browser
AA seq
454 aa
AA seq
DB search
MKPVQKNDRLNVYVEDLTHEGAGVAKIDGYPLFIHGALPGEEVEVHVVKTLKSYGFAKLL
DIKLSSPFRVTAPCPVFDVCGGCQMQHLSYDGQLAFKEKLVRDAMARLGKLPDVPVHAIK
GMDNPWRYRNKSQIPFGERDGETIAGFYRTRSHDIADTDTCIIQSEEADIVMRELKHQLH
AFGIQPYDETAHSGLLRHVVVRKGRATGEVMVVLVTRKKKLPQQEAVIALIRNQVPNVKS
IVQNVNPGKTNVIFGDETVTLWGNDVIEDRIGDVRFEISARSFYQVNPDQTEVLYKQALD
YAQLNGDETVIDAYCGIGTISLFLAQKAKAVMGVEIVPQAIEDAKRNAQLNGFTNTLFEA
GPAEEVIPRWFKEGRKADVLVVDPPRKGCDAHLLGTILEQKPERVVYVSCNPATLARDLR
ILEDGGYRTREVQPVDMFPQTTHVEAVAWLELGM
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacctgtacagaaaaatgaccgcttaaacgtatatgtggaggacttaacccatgaa
ggggcaggcgtggcaaaaatcgatggttatccgttgtttatacacggagcacttccggga
gaagaagtggaagtgcatgttgtaaaaacactgaagtcatatggctttgcaaaattgctc
gatatcaaactctcgtcccctttccgggttacggctccgtgtccggtattcgatgtatgc
ggcggctgtcagatgcagcatttatcctatgatggtcagctggctttcaaagaaaaactg
gtccgcgatgcgatggcacggcttggaaaactgccggatgtgcccgtccatgccattaaa
ggaatggacaatccatggcgctaccgcaataaatcccaaattccattcggggaacgggat
ggggaaacaattgccggtttctatcgtacacgttctcatgatatcgcggatacggataca
tgcatcattcaaagtgaagaagcggatattgttatgcgtgagctgaagcatcaactccat
gcgtttggtattcagccgtatgacgaaaccgcacatagcggactgctccgtcatgtagtg
gtccggaaagggcgggcgacaggagaagtcatggttgtgctcgtcacccgaaagaaaaag
ctgccgcaacaagaagcggtgattgcgttgattcggaaccaggtaccgaatgtgaaatcg
attgtgcagaacgttaacccaggcaaaacgaatgtgattttcggtgatgagaccgtgaca
ctttggggcaatgacgtgatcgaggaccgaattggggatgtgcgttttgaaatttccgca
cggtcattttaccaggtcaatccggatcagacggaagtgctgtataagcaggcgctcgat
tatgcccaattgaacggcgatgaaacggtaatcgatgcgtattgcggtattggaacgatc
tcactgtttttggcacagaaagcaaaagcggtgatgggtgtcgaaatcgtgccgcaggcg
attgaagacgccaagcgtaacgctcaattgaacggattcaccaatacgttgtttgaggcc
gggccggcggaagaagtcattccacgctggttcaaagaagggcgaaaagcagatgtactc
gtagttgatccgccgcgcaaagggtgtgacgcccatctgcttggcaccattttggaacaa
aaaccggagcgagttgtttatgtatcatgcaatccggcgacacttgcccgggacttgcgt
attttggaagacggcggctatcgcacccgggaagtgcagccggtcgacatgttcccgcag
acaacgcacgtagaggccgttgcatggcttgaactcgggatgtga
DBGET
integrated database retrieval system
