Planococcus sp. Y42: B0X71_05185
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Entry
B0X71_05185 CDS
T04763
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pmar
Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmar03019
]
B0X71_05185
Messenger RNA biogenesis [BR:
pmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0X71_05185
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
CUX1_N
Motif
Other DBs
NCBI-ProteinID:
AQQ52548
UniProt:
A0A1Q2KWF5
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All DBs
Position
1023860..1024804
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AA seq
314 aa
AA seq
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MKKGITQYAVGEQVDTFLLVKQSNKGVTTTGNPFMSLVLQDKSGDIEAKLWDTKEEHEKM
YAAETIVKVGGEIHNYRGKNQLRIKSIRPARPEENQSISALVPSAEKSKEELYEELVQFF
FEMKNPKIQRITRHILKQYQQEIMTFPAATKNHHDYVSGLADHTVSMLRLGKSLCELYPS
LNKDLLYSGIILHDIGKVFELSGPIATTYTLEGNLLGHISIMVTEIAKTAQELEIEGEEV
LLLQHMVLSHHGKEEWGSPKKPMIKEAEILHYIDNIDAKMMMLDRALEKTKPGEYTERLF
PLDNRSFYKPEFGS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggaattacccaatacgcggtaggggaacaagtggatacgtttttgctggtc
aagcaatccaataaaggggttacgacaaccggtaatccattcatgtcccttgttctgcag
gacaaaagcggagatatcgaagcgaaactatgggatacaaaagaagaacatgaaaaaatg
tatgctgcagagacgattgtgaaagtcggcggagaaattcataattaccgagggaaaaat
caacttcgcatcaagagtatccggccggctcgtcccgaagaaaatcagtcgatttctgca
ttggtgccttctgcggaaaaaagcaaggaagagctttatgaagagctggtgcagtttttc
ttcgaaatgaaaaatccgaagatccagcggattacccgccacatcctgaagcagtatcag
caggagatcatgacgttccccgcagcgacgaaaaatcatcatgattacgtatcaggactt
gctgatcacacagtttctatgctgcggctcggtaaaagtctttgcgaactgtatccgtcg
ctgaataaggatttattgtattcaggcattattctgcatgatatcggcaaggtgtttgag
ctatccgggcctattgccacaacatacaccttggaagggaacctgcttggccatatttcc
attatggttacagaaatcgccaaaacagcgcaggaacttgaaatcgaaggggaagaagta
ctgctgcttcagcatatggtgctctctcatcatggaaaagaagaatggggcagcccgaaa
aaaccaatgatcaaggaagcggaaatccttcactacatcgacaacattgatgccaagatg
atgatgctcgaccgtgcgcttgagaaaacaaagcccggggaatacaccgagcggctattc
ccgctggataaccgctccttctataaaccggaatttggttcataa
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