KEGG   Planococcus sp. Y42: B0X71_06520
Entry
B0X71_06520       CDS       T04763                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
pmar  Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmar03016]
    B0X71_06520
Enzymes [BR:pmar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     B0X71_06520
Transfer RNA biogenesis [BR:pmar03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    B0X71_06520
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL
Other DBs
NCBI-ProteinID: AQQ52771
UniProt: A0A1Q2KX47
LinkDB
Position
1260613..1261158
AA seq 181 aa
MSSHYFIGIRLPEETAASLALQRDSWRLRSHKQLPPAEDLHITLVYIGADPNDELPDVLQ
ALEAVDMAAFEVTVSGAGTFGNPATPRVIYADVQENPHLRELQRQVEAALEPFSLRPDKR
PFVPHITLAKKWKGNDPLTEPLTIGIERFTVSEFSLFQVHLDKRPRYEAVRTYELSENAS
K
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtccagtcattattttatcgggatccggctgccggaagagacggcagccagtctggcg
ctgcagcgggacagctggcggcttcgatcacataagcagcttccgccggccgaagatctg
catattacgcttgtttatatcggcgcggatccgaacgatgaattaccggatgtgctgcag
gcactggaagcggtcgatatggctgctttcgaagtgaccgtcagcggagccggtaccttc
ggcaacccggcaactccgcgtgtcatttatgcagatgtgcaggaaaatccgcatcttcgg
gaacttcagcgacaagtggaagcggcgctcgaaccgttcagcctgcggccagataaacgt
ccttttgtgccgcatatcacgctcgcgaaaaaatggaaaggcaacgacccgcttacagaa
ccgcttacgattgggatcgagcgattcactgtcagcgaattttcgctctttcaggttcat
ttagacaagagaccccggtatgaagcggtccggacttacgaattaagtgaaaacgcatca
aaatga

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