Planococcus sp. Y42: B0X71_06520
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Entry
B0X71_06520 CDS
T04763
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pmar
Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmar03016
]
B0X71_06520
Enzymes [BR:
pmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B0X71_06520
Transfer RNA biogenesis [BR:
pmar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B0X71_06520
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
AQQ52771
UniProt:
A0A1Q2KX47
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All DBs
Position
1260613..1261158
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AA seq
181 aa
AA seq
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MSSHYFIGIRLPEETAASLALQRDSWRLRSHKQLPPAEDLHITLVYIGADPNDELPDVLQ
ALEAVDMAAFEVTVSGAGTFGNPATPRVIYADVQENPHLRELQRQVEAALEPFSLRPDKR
PFVPHITLAKKWKGNDPLTEPLTIGIERFTVSEFSLFQVHLDKRPRYEAVRTYELSENAS
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcattattttatcgggatccggctgccggaagagacggcagccagtctggcg
ctgcagcgggacagctggcggcttcgatcacataagcagcttccgccggccgaagatctg
catattacgcttgtttatatcggcgcggatccgaacgatgaattaccggatgtgctgcag
gcactggaagcggtcgatatggctgctttcgaagtgaccgtcagcggagccggtaccttc
ggcaacccggcaactccgcgtgtcatttatgcagatgtgcaggaaaatccgcatcttcgg
gaacttcagcgacaagtggaagcggcgctcgaaccgttcagcctgcggccagataaacgt
ccttttgtgccgcatatcacgctcgcgaaaaaatggaaaggcaacgacccgcttacagaa
ccgcttacgattgggatcgagcgattcactgtcagcgaattttcgctctttcaggttcat
ttagacaagagaccccggtatgaagcggtccggacttacgaattaagtgaaaacgcatca
aaatga
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