Planococcus sp. Y42: B0X71_06795
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Entry
B0X71_06795 CDS
T04763
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0X71_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_06795
Enzymes [BR:
pmar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B0X71_06795
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B0X71_06795
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B0X71_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AQQ52823
UniProt:
A0A1Q2KXF1
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All DBs
Position
1324694..1325563
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AA seq
289 aa
AA seq
DB search
MPELPEVEGVVRLIKPAVEGRTITDVFISDTVRRSKAGGKDAILKRISEEGFIEELTGAS
FLSVERRSKYIYFDMQKEGRFLFVNHLGMTGAWFHVGSLEEIREEKFRRHVHVIFTLDDG
SLFVYSDIRRFGEMRVLQDESGYPPLLLMAPEPFGEDALQHFLEMSERPKYAKKPVKEVI
MDGQVISGCGNIYATEALFKERVRPDRPVGGLTSEEKVKLFQTIADILAESIEAGGSTIS
DYRNVNGESGSMQHRLKMYGKKHCLECGHETENMKIGGRTSTFCPVCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaagtggaaggcgttgtccggctgatcaagccggccgtcgaaggc
cgaacaataacagacgttttcatatcggatactgtccggagatcgaaagccggaggaaaa
gatgccatcttgaaacggatcagtgaggaaggatttattgaagaactgacgggtgcatca
tttctgtccgtggaacgccggagcaagtacatctattttgatatgcagaaagaaggccgg
tttttatttgtaaaccatctcggcatgacgggcgcctggtttcatgtcggttcgcttgaa
gaaatccgggaagagaaattcaggcggcatgtccatgttattttcacacttgatgacgga
tcgctgttcgtgtattccgatattcgccgctttggtgaaatgcgggtgctgcaggatgaa
tccggctatccgccgctcctgctgatggcaccggagccgttcggggaagacgccctgcag
cattttctggagatgagcgaaaggccgaaatacgccaaaaagccggttaaggaagtcatc
atggacggccaggtcatttcaggctgcggcaatatttatgcgacagaggcgctgtttaaa
gagcgggtccgcccggaccggccagtgggtggtttgacttctgaagaaaaagtgaaactg
ttccagacgatcgccgatatcctggcagagagcattgaagcgggaggcagcaccatttcc
gattaccggaacgtaaacggtgaatccgggagcatgcagcaccgtctgaaaatgtacggg
aaaaagcactgcctggaatgcggtcatgaaacggagaatatgaaaatcgggggccggaca
tccacgttttgtccggtgtgccaaaagtga
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