Planococcus sp. Y42: B0X71_07300
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Entry
B0X71_07300 CDS
T04763
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03410
Base excision repair
pmar03430
Mismatch repair
pmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0X71_07300
03430 Mismatch repair
B0X71_07300
03440 Homologous recombination
B0X71_07300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_07300
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B0X71_07300
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B0X71_07300
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B0X71_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AQQ52914
UniProt:
A0A1Q2KXT5
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All DBs
Position
1430053..1432395
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AA seq
780 aa
AA seq
DB search
MIESKKQWQLSTPDEHKTKQLERELDIPPVLAKILVSRGMDTPEKAHAFMNIDHTSLHDP
YLLKDMDKAVTRIREAIDKQEQIIVYGDYDADGVTSTSVMMTVLRDLGADVTFMIPNRFD
HGYGPNSELFQLASDSGCTLLITVDNGVSGIEQAKLAKQLGMDLIITDHHDIGEVLPEAH
AVIHPRHPDSTYPFGELAGVGVAFKLAHALYGEAPDHLLELAAIGTVADLVPLHGENRYL
VREGISRLKTTGRAAIAALCEVAGVGAHEITEETLGFAFGPRINAIGRLQDAGPAVDLLL
SADPAEARGLAKQLDMLNKERQSIVAKITEQATAQVHARHPDGAPHVIVVAQEGWNPGVV
GIVASRLVELFYRPTIVLSLDPETGKAKGSARSIEGFHLYNELAQNRDILPHFGGHPMAA
GMTLAAADVDALRERLNRQGEAVLTDDQLIPAVEIDIPVEPAEISIETLESIRSLAPYGM
GFSRPKFYLNGVRAATIRKIGANKNHLKMELEKDGTAIDAIGFSLGHLADELTPEVKVEA
IGDLQINEWNGRKKPQLLLEDLRTTEWQLYDIRGVRQVTRWAPLIPETDQLYVVFRNETV
EAFQKLVKAPIKQADGLDEADCAAHHLVLLDLPDSEQQLQDVLLRIRPRRVYCHFFTEES
HYFGTLPDRDQFKWLFGFLKQRGRFDVRKDGETLAKHKGWSRDSLIFMLQVFFELGFVKM
NNGLTEIAETPVKRDLSEAPSYQKRQRQMELEQKLLYASYHDLKEWFNAQLSAREEKVWI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatccaaaaaacagtggcaattgtccacacctgatgaacataaaactaaacag
ctggagcgggaactcgatattccgccggttcttgcaaaaatactcgtttcccgcggcatg
gatacgcctgaaaaagcccatgcttttatgaatatcgaccatacatcgcttcacgatccg
tatttattgaaagacatggataaagcggtcacccgcatccgcgaggcgatcgacaaacag
gaacagatcatcgtatacggcgattatgatgccgatggcgtcacgagcacatcggtcatg
atgaccgtgctccgggacctcggagcggacgtgacgttcatgatcccgaaccgcttcgat
cacggctacggtccgaacagtgaacttttccagttggcatccgacagcggctgcacgctc
ttgatcaccgtcgataacggcgtgtcgggcatcgaacaggctaagctcgccaagcagctc
ggcatggatctcatcatcaccgatcaccacgatatcggggaggtgctgccggaagcgcat
gctgtcatccacccccgccatccggactctacatacccattcggcgaactggccggcgtc
ggcgtcgccttcaaattggcgcatgccctttacggcgaagcgcctgatcatttattggaa
ctggccgcgattggcaccgtggcggacctcgtgccgctgcacggggaaaaccgctatctc
gtccgggaaggcatcagccgcctgaagacgaccggccgtgcagcgattgcggcgctttgt
gaagtggcgggcgtcggagcgcatgaaatcacggaagagacgctcggcttcgctttcggt
ccccgcatcaatgcgatcggccggctccaggatgccggtcccgcagtcgatcttctgctg
tcggcagacccggcggaagcgcgggggcttgccaagcaactcgatatgctcaataaagaa
cggcagtccattgtcgcgaaaatcacggagcaggcgacagcccaagtgcatgcgaggcat
ccggacggcgcgccgcatgtcatcgttgtcgctcaggaaggctggaatcccggtgtcgtc
ggcattgtcgcatcccggctcgtagaattgttctaccggccgacgatcgtcttgtcgctt
gacccggaaaccggaaaagcgaaagggtccgcccggagcatcgaaggctttcatctatac
aatgaactggcgcagaaccgggatatcctcccgcatttcggtggccacccgatggcggcg
ggcatgacgcttgcagccgctgacgtcgatgcgctgcgggagcggctcaaccggcaagga
gaagccgtgctgacggacgatcaattgattccggcagtggagattgatattccggtggaa
ccggctgaaatcagcattgagacgcttgaatcgattcggtcgctcgccccgtacggcatg
ggcttcagccggccgaaattttatctgaacggtgtccgggcagcgacgatccgcaaaatc
ggcgccaataagaaccatttgaaaatggaacttgaaaaagacggcacggcgatcgacgct
atcggattcagcctcggtcatttggcggatgagctgacaccggaagtgaaagtggaagcg
atcggcgatctgcagatcaacgaatggaatggccgcaaaaagccgcagctgctgctggag
gacttgcggacgaccgagtggcaattatatgacatccgtggtgtgcggcaagtgacgcgc
tgggcgccgctcattcctgaaaccgaccaactgtacgtggtgttccggaacgaaacggtg
gaagcattccagaagctcgtgaaggcgccgatcaagcaggcggacggacttgatgaggcg
gattgtgctgcccatcaccttgtgctgctcgatctgccggacagcgaacagcagctgcag
gatgtgctgctgcgcattcgtccaagaagggtgtactgccatttcttcacagaagaatcc
cattatttcggcacattgccggaccgggatcagtttaaatggctgttcggcttcctgaag
cagcggggccggttcgatgtgcggaaagacggagagacgctcgcaaagcataaaggctgg
agccgcgattcactcatttttatgctgcaggtgttttttgagctcggatttgttaaaatg
aataatggactgactgaaatcgcggaaacgcctgtcaaacgggatctttcagaagcacca
tcttatcagaaacgccagcggcagatggaacttgaacagaaactcctgtatgcgtcgtat
catgacctgaaggaatggttcaatgcccagctgtcagccagggaggaaaaagtatggatt
tga
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