Planococcus sp. Y42: B0X71_11795
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Entry
B0X71_11795 CDS
T04763
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X71_11795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmar03019
]
B0X71_11795
Messenger RNA biogenesis [BR:
pmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0X71_11795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
AQQ55106
UniProt:
A0A1Q2L3V6
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Position
complement(2276746..2278299)
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AA seq
517 aa
AA seq
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MNEILFALLGLIIGAAVGYWALKKVNDSNVAGARSVANQILEDANRQAEALKKEALLEAK
DENHKLRTEAENEIRERRSELQKQENRLLQREENLDRKDEALNKREASLERKDTALAEKQ
QHIEQMESKAEEMIAQQSEELERISALTRDEAKSVIMEEVENELSTDIAVMIKEADARVK
EEADKNAREILSLALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGID
LIIDDTPEAVVLSGFDPVRRETARLALEKLVSDGRIHPARIEEMVEKSRREVDEQIREAG
EQTTFDIGIHNLHPDLIKIMGRLKYRTSYGQNVLKHSKEVAFLSGLLAAELGEDVTLARR
AGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEATSVISVIVAAA
DALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIIVQPEQVDDIT
AHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatcctcttcgctttgctaggactcatcatcggtgcagctgttggatattgg
gctttgaagaaagtgaacgattccaatgtagccggagcccggagtgtcgcaaaccagatt
ttagaagatgcgaatcgacaggccgaggcgctgaaaaaagaagctcttttggaagcgaaa
gacgaaaatcacaaattgcgcactgaagcggagaacgaaatccgggaacgccggagcgaa
ctgcaaaagcaggaaaaccggctgcttcagagagaagaaaatctagatcgcaaggatgag
gcgctgaacaagagagaagcaagcctggaacgcaaagatacagcgcttgctgaaaaacaa
cagcatattgagcagatggaaagcaaagcggaggaaatgattgcacaacaatccgaagaa
cttgaacggatttccgcactgacacgcgatgaagcgaaatcggtcatcatggaagaagtc
gaaaacgaactgtcgacggatattgccgtgatgatcaaggaagcggatgcgcgtgttaag
gaagaggcagacaaaaacgcacgggagattttgtcgcttgctctgcaacgctttgccgca
gaccatgtcgcagaaacgacggtgtctgtcgtcaatttgcctaacgatgagatgaaaggc
cggatcatcgggcgggaaggacgtaatatccggacgcttgagacattgaccggcatcgac
ttgatcatcgatgacacaccggaagcggtcgtgctgtccgggtttgatcctgtcagacgg
gaaactgcccggctcgcgcttgaaaaacttgtctcggacggccggattcatccggcccgc
atcgaagagatggttgagaaatcgagacgcgaagtggatgagcagatccgggaagccggt
gaacagacgacattcgatatcggcatccataatctccatccagatctcatcaaaatcatg
ggccgtctcaaataccgtacaagttatggacagaatgtgctgaaacactcgaaagaagtc
gctttcctttccggtctgctcgcagcagaactgggagaagacgtcacgctcgcacgccgg
gctggtctcctccatgatatcgggaaagccattgaccacgaagtggaaggcagccacgta
gaaattggtgtggagcttgcaactaaatataaagagcatcctgtcgttattaattcgatt
gcttctcaccatggcgatacggaagcgacttctgtcatctccgtcatcgtcgctgcagcg
gatgccttgtccgccgcacgtcctggcgccagaagtgagacgcttgaaaattatatccgc
cggcttgaaaaactggaggaaatctcagaatcgtatgacggcgtcgagaaatccttcgcc
attcaggcaggccgtgaagtccggatcattgtgcagccggaacaggttgacgatataacg
gctcaccgcctggcacgggatatccggaagcggatagaggaagagctcgattatccgggt
catattaaagtgacggttatccgggaaacgcgggcagtggaatacgcaaaataa
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