Planococcus sp. Y42: B0X71_11880
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Entry
B0X71_11880 CDS
T04763
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X71_11880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmar03019
]
B0X71_11880
03016 Transfer RNA biogenesis [BR:
pmar03016
]
B0X71_11880
Enzymes [BR:
pmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B0X71_11880
Messenger RNA biogenesis [BR:
pmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B0X71_11880
Transfer RNA biogenesis [BR:
pmar03016
]
Prokaryotic type
tRNA degradation factors
B0X71_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
SPATA25
V-ATPase_H_C
OB_RRP5_4th
SMC_ScpB
Motif
Other DBs
NCBI-ProteinID:
AQQ53711
UniProt:
A0A1Q2KZV2
LinkDB
All DBs
Position
complement(2297343..2299454)
Genome browser
AA seq
703 aa
AA seq
DB search
MEQNKKVYTLDWAGRQLQVEVGQLAKQANGAALIRYGDTAVLSSATASKKPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKATLISRLIDRPIRPLFPDGFRNEVQVISMVMSV
DQDCPSDMAAMFGSSLALMISDIPFGGPIAGVTVGLVDGEFIINPTNAQMEKSSINLIVA
GTKDAVNMVEAGAKEVPEETMLEAIMFGHNEIKRLISFQEEIAAEVGKEKTEVQLYELDA
ELTDQIKAAALEDMNKAVQVQEKQERAEAINEVKERVLADYEDADDDVKKQAGQILDKMV
KDEVRRLITEEKVRPDGRTPDEIRPLSSEVGVLSRTHGSGLFTRGQTQALSVCTLGALGD
VQIIDGLGLEESKRFMHHYNFPLFSVGETGPIRGPGRREIGHGALGERALEVVIPDENEF
PYTIRLVSEVLESNGSTSQASICASTLALMEAGVPIKAPVAGIAMGLVKKGDNYTVLSDI
QGMEDHLGDMDFKVAGTAAGVTALQMDIKIEGLSREILEEALLQAKKGRMHILDSMLATI
SEPRKQLSAFAPKITVIKINPDKIRDVIGPGGKVINKIIEETGVKIDTEQDGTIFISSVN
EEMNARAKQIIEEIVREAKVGEYYLGKVKRIEKFGAFLELFKGKDGLLHISEIQEERTKN
VEDVLKLGDELLVKVIEIDNQGRVNLSRKTVLKEEKQAAEKQS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaataaaaaagtctatacattggattgggcaggccgccaattgcaagtggaa
gtcggccagctggcaaaacaggcaaacggagcggcactcatccgctatggcgatacagcg
gtgctgtcatcggcaacagcttccaaaaaaccgaaaccgcttgatttctttccgctgaca
gtcaattacgaagaacggttgtatgcagtcggaaaaatccccggcgggttcatcaaacgg
gaaggccgtccgtctgaaaaagcgacattgatcagccgattgattgaccggccgatccgg
ccattgttccctgatggtttccgaaacgaagtccaggtgatttcgatggtcatgtcagtg
gatcaggactgcccatccgatatggcggcgatgttcggatcttccctcgcacttatgatt
tccgatattcctttcggcggtccgattgccggggttacagtcggcctcgtagatggtgag
ttcatcattaacccgacaaatgcccagatggaaaaaagcagcattaatctgattgttgcc
ggaacaaaagatgcggtgaacatggtggaagccggtgcgaaagaagttccggaagaaacg
atgcttgaagcaatcatgttcggccataatgagattaaacggctgatttcattccaggaa
gaaattgctgcggaagtcggtaaagaaaagaccgaagtgcaattgtatgaattggatgca
gaactgacagaccagatcaaggccgctgcactggaagacatgaacaaagcggttcaggta
caggaaaagcaggagcgcgcagaagcgatcaacgaagtgaaagaacgggtcctcgctgat
tatgaagatgcagatgatgacgtgaaaaagcaagctggacagattctagataagatggtg
aaagatgaagtccgccgcttgatcactgaagaaaaagtccgcccggatggacggacaccg
gacgagattcgtccgctgtcttcagaagttggtgtattgagccggacgcacggttccggt
ctatttacgcgcggacagacgcaggcgttgagcgtctgtacgctcggggcactcggtgat
gttcagatcattgacggactgggtcttgaagaatccaagcgattcatgcaccattataat
ttcccgctgttttcagtcggtgaaaccggtccgatccgtgggccgggccgccgtgaaatc
ggacatggggcactcggcgaacgcgcacttgaagtggtgattccggatgaaaatgaattc
ccatacaccatccgtcttgtttcggaagtgctggaatccaatggttccacttcacaggca
agcatctgtgcatcgacacttgcattgatggaagctggcgttccgattaaagcacccgtt
gccggtatcgcgatgggccttgtgaaaaaaggggataattataccgttctctcggacatc
cagggaatggaagatcacctgggagacatggactttaaagtggcgggaacagctgcaggt
gtgacggcacttcaaatggatatcaaaatcgaagggctgtcccgggagattctggaagaa
gcgttgctgcaggcgaaaaaaggccgcatgcacatcctggacagcatgcttgccaccatt
tctgagccgcgtaagcagctgtccgcgtttgcacctaagatcacagtgatcaaaatcaat
ccggataagatccgcgatgtgatcggaccgggcggaaaagtgatcaataagatcattgaa
gaaacgggcgttaaaattgacactgaacaggatggcacaattttcatttcctcggtcaat
gaggagatgaatgcacgggccaaacagattattgaagaaattgtccgtgaagcgaaagtc
ggggagtactacctcggcaaagtgaagcggatcgagaaattcggtgcattcctggaattg
ttcaaaggcaaggatggcttgcttcatatttctgaaatccaggaagaacggacgaagaat
gtggaagatgtccttaaacttggagatgaactgctcgtcaaagtcatcgaaatcgataac
cagggacgcgtcaacctgtcccgtaaaacggtactgaaagaagaaaaacaggcagcagaa
aaacaaagctga
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