Planococcus sp. Y42: B0X71_12015
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Entry
B0X71_12015 CDS
T04763
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmar
Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmar03032
]
B0X71_12015
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_12015
Enzymes [BR:
pmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B0X71_12015
DNA replication proteins [BR:
pmar03032
]
Prokaryotic type
DNA Topoisomerases
B0X71_12015
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B0X71_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Toprim_3
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AQQ53738
UniProt:
A0A1Q2KZW7
LinkDB
All DBs
Position
complement(2327253..2329325)
Genome browser
AA seq
690 aa
AA seq
DB search
MADFLVIVESPAKAKTIERYLGKKYKVKASLGHLIDLPKSQMGVDVEHDYEPKYITVRGK
GPILQELKTQAKKAKKVYLAADPDREGEAIAWHLAHALNIDVDSDCRVVFNEITKDAIKE
SFKNPRAIDMDLVDAQQARRVLDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDREN
EVKNFTPEEYWTIGAEFEKDKKAFEAQYYGSGGKKAELKNEEEVNQVLATMQGDEFEVIS
VVKKERKRNSSASFTTSSLQQEAARKLNFRARKTMMLAQQLYEGIQLGKKEGSVGLITYM
RTDSTRISDTAKNEASAFITEEYGKEYLSAKGQAKQSGKAQDAHEAVRPTSVARTPASVK
DFLSRDQYRLYKLIWERFLASQMAPAILDTVTAELKNGEAIFRANGSQVKFPGFMKLYVE
GSDDQKEEKDNVLPELAEGDFVKAQHIDPRQHFTQPPPRFTEARLVKTMEELGIGRPSTY
APTLDTIQRRGYVTLDAKKFIPTELGEIVHELMVEFFPDVVNIKFTAKMEHDLDAVEDGN
VRWVEIIDEFYKDFGKHVEVAEEEMEKVQIKDEPAGEDCEHCGSPMVYKLGRYGKFMACS
NFPECRNTKAIVKGTGVTCPLCKEGEVVERKSKKKRIFYGCDRYPECEFISWDKPVERPC
PKCQSLLVEKRSKKGVQIQCTECDYKEETT
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctgactttttagtcattgttgaatcgccggcaaaggcgaaaacaattgaacgttat
ttaggaaaaaagtataaagtgaaggcttcactcggccatttgatcgatttgccgaaaagt
cagatgggtgtcgacgttgaacatgattacgaaccaaagtacattacggttcgcggtaaa
ggccctatccttcaagagctgaaaacccaggcgaaaaaagcgaagaaagtctatctcgca
gctgaccccgacagagaaggggaagcgatcgcctggcatttggcacacgcgctgaatatt
gatgtcgattcggattgccgcgtcgtattcaatgaaatcacgaaagatgcaatcaaagag
tccttcaaaaatccgcgtgccatcgatatggatcttgttgatgcacaacaagcccgccgc
gtacttgaccggctggtcggctacagcatcagcccgctattgtggaagaaagtgaaaaaa
ggactctccgcaggccgggtacaatcggtcgcattgaaactgatcattgaccgggagaac
gaagtgaaaaatttcacaccggaagagtactggaccatcggcgccgaattcgaaaaagat
aaaaaagcgtttgaagctcagtattacggttccggcgggaagaaagcggaactgaaaaac
gaagaagaagtcaaccaggtactggcgactatgcaaggcgacgaattcgaagtcatcagc
gtagtgaaaaaagaacggaaacgtaattcatccgcttcgttcacgacttcttctcttcag
caggaagcagcccggaagctgaacttccgggccagaaagaccatgatgctcgcccagcag
ctatatgaagggattcaattgggcaaaaaagaaggaagcgtcggtctgattacgtacatg
cggacggactcaacccgaatttcagatacagccaaaaatgaagcaagtgcattcattaca
gaagaatatggaaaagaatatctttcggcgaaggggcaggcgaagcagtcggggaaagcg
caggatgcccacgaggctgtccggccgacaagtgtggcgagaacgcctgcatctgtgaaa
gactttctgtcccgcgatcaataccggctgtataagctgatctgggagcgattcctggcg
agtcagatggctcctgccatcctcgatacagtgacggcagaactgaaaaacggcgaagcg
attttccgggcaaatggttctcaggtgaagtttcccggtttcatgaagctgtacgtggaa
gggtcagatgaccagaaagaagaaaaagataatgtgttacctgaactggcggaaggtgat
ttcgtcaaagcccagcatatcgacccgaggcagcatttcactcagccgccgccgcggttc
actgaggcgcgtcttgtaaagacgatggaagaactgggcatcggtcggccatcaacgtat
gcaccgacgctggatacgattcagcgccgtggatatgtcaccctggatgctaaaaagttc
atcccgacggaacttggagaaatcgttcatgaattgatggttgagttctttccggatgtt
gtcaatattaagttcactgcaaaaatggaacatgatttggatgcagttgaggatggcaat
gtaagatgggtcgaaatcatcgatgaattttacaaggatttcggaaagcacgtggaagtg
gcggaagaagaaatggaaaaggtgcagatcaaggatgagccagccggcgaagactgcgaa
cattgcggatcgccgatggtgtataagcttggccgctatggcaaattcatggcttgcagc
aattttccggaatgccgcaacacgaaagcaatcgtcaaaggcacaggggttacctgcccg
ctttgcaaagaaggcgaagtcgtggagcggaaaagcaagaaaaagcgtattttttatggc
tgtgaccgctatcctgagtgcgagttcatttcctgggacaagccggttgaacggccgtgt
ccgaaatgtcagagtctgcttgttgaaaagcggtctaaaaaaggcgtgcagatccagtgc
acggagtgtgattataaagaggaaacaacctaa
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