Planococcus sp. Y42: B0X71_14055
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Entry
B0X71_14055 CDS
T04763
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmar
Planococcus sp. Y42
Pathway
pmar02020
Two-component system
pmar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0X71_14055
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B0X71_14055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmar03021
]
B0X71_14055
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmar02035
]
B0X71_14055
Transcription machinery [BR:
pmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0X71_14055
Bacterial motility proteins [BR:
pmar02035
]
Flagellar system
Flagellar assembly proteins
Stator
B0X71_14055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_5
PCI
HTH_3
PriX
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AQQ55134
UniProt:
A0A1Q2L432
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All DBs
Position
complement(2744468..2745241)
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AA seq
257 aa
AA seq
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MSSKASKEELVSWEGWQQHRDPDAGNDLVERYLPLVDYVIQRFMINLPKTVDKDDVRSLA
YEGLLDAFDKFDIERGLKFETYASWRIKGAIIDGLRHSDWLPRSVRDKVKKIEQAYALLE
QQNNQSVTDAEVSMYLGITVKELNKTVSEAALSAMISIDEAVNDDSESTGKHQLIQSGKE
GSPEHHLSEQLIKEALMRAIERLPEKERIVIALSYYEELKLTEIAEVLGVSVSRISQLHS
KAILRLQAAVLSVNEAY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaagcatcaaaagaagagctggtcagctgggaaggctggcagcagcatcgg
gatcccgatgcagggaatgacttagtcgagcgctacctgccattggtcgactacgtcatt
cagcgctttatgatcaatttaccgaaaacggtcgacaaagatgacgtccgcagcctggcg
tatgaggggttactcgatgcgtttgataaattcgatattgaacgcggcctgaaattcgag
acgtatgcctcctggcggatcaaaggcgccatcattgatgggttgcggcacagcgactgg
ctgccccgttcggtgcgtgataaggtcaaaaaaattgagcaggcgtatgcgttactcgaa
cagcagaacaaccagtcggtgaccgatgcggaagtcagcatgtatttgggcatcacggtg
aaagagctgaataagacggtgtcggaagcggcgttgtcggcgatgatctccatcgacgaa
gccgtgaacgacgattccgaatcgacaggaaagcatcaattgatccagagcgggaaagaa
ggatcgccggaacatcacctgtccgagcaattgatcaaagaagcactgatgcgggcgatc
gagcggctgccggaaaaagaacggatcgttatcgcgcttagctattacgaagaactgaaa
ctgaccgaaatcgctgaagtgctcggtgtcagcgtatcccgcatttcacagctgcattca
aaagcgatactgcggctgcaggcggccgtgctgtcggtgaacgaggcatattga
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