KEGG   Planococcus sp. Y42: B0X71_14055
Entry
B0X71_14055       CDS       T04763                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pmar  Planococcus sp. Y42
Pathway
pmar02020  Two-component system
pmar02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0X71_14055
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    B0X71_14055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmar03021]
    B0X71_14055
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pmar02035]
    B0X71_14055
Transcription machinery [BR:pmar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0X71_14055
Bacterial motility proteins [BR:pmar02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    B0X71_14055
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Rv2175c_wHTH Sigma70_ECF HTH_5 PCI HTH_3 PriX CT_C_D
Other DBs
NCBI-ProteinID: AQQ55134
UniProt: A0A1Q2L432
LinkDB
Position
complement(2744468..2745241)
AA seq 257 aa
MSSKASKEELVSWEGWQQHRDPDAGNDLVERYLPLVDYVIQRFMINLPKTVDKDDVRSLA
YEGLLDAFDKFDIERGLKFETYASWRIKGAIIDGLRHSDWLPRSVRDKVKKIEQAYALLE
QQNNQSVTDAEVSMYLGITVKELNKTVSEAALSAMISIDEAVNDDSESTGKHQLIQSGKE
GSPEHHLSEQLIKEALMRAIERLPEKERIVIALSYYEELKLTEIAEVLGVSVSRISQLHS
KAILRLQAAVLSVNEAY
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagcagcaaagcatcaaaagaagagctggtcagctgggaaggctggcagcagcatcgg
gatcccgatgcagggaatgacttagtcgagcgctacctgccattggtcgactacgtcatt
cagcgctttatgatcaatttaccgaaaacggtcgacaaagatgacgtccgcagcctggcg
tatgaggggttactcgatgcgtttgataaattcgatattgaacgcggcctgaaattcgag
acgtatgcctcctggcggatcaaaggcgccatcattgatgggttgcggcacagcgactgg
ctgccccgttcggtgcgtgataaggtcaaaaaaattgagcaggcgtatgcgttactcgaa
cagcagaacaaccagtcggtgaccgatgcggaagtcagcatgtatttgggcatcacggtg
aaagagctgaataagacggtgtcggaagcggcgttgtcggcgatgatctccatcgacgaa
gccgtgaacgacgattccgaatcgacaggaaagcatcaattgatccagagcgggaaagaa
ggatcgccggaacatcacctgtccgagcaattgatcaaagaagcactgatgcgggcgatc
gagcggctgccggaaaaagaacggatcgttatcgcgcttagctattacgaagaactgaaa
ctgaccgaaatcgctgaagtgctcggtgtcagcgtatcccgcatttcacagctgcattca
aaagcgatactgcggctgcaggcggccgtgctgtcggtgaacgaggcatattga

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