Planococcus sp. Y42: B0X71_15770
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Entry
B0X71_15770 CDS
T04763
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmar
Planococcus sp. Y42
Pathway
pmar03420
Nucleotide excision repair
pmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0X71_15770
03430 Mismatch repair
B0X71_15770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmar03400
]
B0X71_15770
Enzymes [BR:
pmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0X71_15770
DNA repair and recombination proteins [BR:
pmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0X71_15770
MMR (mismatch excision repair)
Other MMR factors
B0X71_15770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AQQ54415
UniProt:
A0A1Q2L1R7
LinkDB
All DBs
Position
complement(3102772..3104922)
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AA seq
716 aa
AA seq
DB search
MGNFFQRKEQELGVKLNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRIGYLIEEKNASP
NRIKAITFSRASATDMAERYKRFFPGLPAVDFSTIHSLAFRIVRDYFQGKPYVMIEGNGK
QGLNKRQLLKEMYQTEMDEQITEDQLDELMSFISFVKNKMMPKEKWRKLKGPFDGAADIL
RTYEAFKENYDTRLVDFDDMLTLANEALERRPDLLAKYQNMWDYVMTDESQDTSLVQHAI
VEKLVASHRNLCVVADDDQSIYTWRAAEPTYLLKFKTVYADAYVMKMERNYRSSKTIVDA
ANQFIKTNKQRHDKNMHTDREEGNPIVMRRFASEETQLQYVLKELKKLDHYGDTAILYRN
NSSSTILMAELNRLGIPFYMKDADNRFFAHWIVEDMLNFMRFSLKPERADVYAKIAAKTN
AYWTGSQLKAMNRVKPAERNGLDEITRSVTMKDYQLKIVEQQKKWFQSMQEMKPSKAIKT
IRKELGYDQMLTSRAEKFGMRLNYLTQILATLEQIAEPLPSMAAFAQRLRELEEVTQEAK
NEKTDEMLTLSTFHSSKGLEFDRVYMVDLNQGVIPAEEDQEEPALLEEARRLYYVGMTRA
KAHLELLSYDEESQFTAEVREVGNRLGKPEKPESVHKSVQKVKSAAAPASLKVPVNPNAI
RSADVLTAGTRIRHRVFGLGKITERTADRISVQFEKQHREFSIEICLSHKLLEMAQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatttttttcagcgcaaagagcaggaactgggcgtaaagctgaataaaatccag
cgcaaagcggtcgagcggacggaaggtccgctattgctgctcgcctgtccgggttccgga
aaaacgacgacgatgatcatgcgaatcgggtacttgattgaggaaaaaaatgcatcgccc
aaccggattaaagccatcacattcagccgagcatccgccacggacatggctgagcgctat
aagcggttttttccgggacttccagcggtggatttctcgaccattcacagccttgcattc
cggattgtccgagattactttcagggtaagccatacgtgatgatcgaggggaatgggaag
cagggcctgaataagcggcagctgctgaaagaaatgtatcagaccgaaatggacgaacag
atcacagaagatcaactcgatgagttgatgtcattcatttcgtttgtgaaaaataaaatg
atgccgaaagaaaaatggcgtaaattgaaagggccttttgatggcgcggctgatattctc
cggacctatgaggccttcaaggaaaactatgatacccggcttgtggatttcgatgatatg
ctgacactggccaatgaggcgttggagcggcggccggatctgctggcgaagtatcagaac
atgtgggattacgtcatgacagatgagagccaggatacgtcgctcgtacagcatgccatc
gtggaaaaactggtggcgagccaccggaatttatgcgtggtggcggacgatgatcagtcc
atttatacatggcgcgcagcagaaccgacgtacctgctgaagtttaagaccgtctatgcg
gatgcatatgtcatgaaaatggagcgcaattaccgctcctcgaaaacgattgtcgatgct
gccaatcagttcatcaaaacgaataaacagcgccatgataagaatatgcatacggaccgg
gaagaaggcaatcccatcgtcatgcggcgctttgcatcagaagaaactcagcttcagtac
gtgctgaaggaattgaagaagctggatcattacggggatacggctattttgtaccgcaat
aattcatcttccaccatcctgatggctgaactgaaccggctgggaattcctttttatatg
aaagatgcggataaccgctttttcgcccattggattgtggaagacatgctgaacttcatg
cggttcagcctgaaaccggaacgggcggatgtttatgcgaaaatcgctgccaagacgaat
gcttactggaccggttcccagttgaaagcgatgaaccgggtgaagccggcagagcgcaac
gggctggatgaaatcacccgcagtgtcacgatgaaagattatcagcttaaaatcgtggag
cagcagaaaaaatggttccagtcgatgcaggagatgaaaccgtcaaaagcgatcaagacg
atccgcaaagaactcggatatgaccagatgcttacgagccgggctgaaaaatttggcatg
cggctgaattacctgacgcagatcctggctacgctggaacagattgcagaaccgcttccg
tccatggctgctttcgcgcaacgcctgcgggaacttgaggaagtgacgcaggaagcgaaa
aacgaaaaaacggatgagatgctgacgctgtcgacgttccatagctcaaaaggactcgaa
tttgaccgggtctacatggtggatctgaaccaaggagtgattccagcggaagaggatcag
gaagaaccggctctcctggaagaggcccggcgcttgtactatgtcgggatgacccgtgcg
aaagcccatttggaattgctcagttacgatgaagaatcccagtttacagcagaggtgcgg
gaagtgggcaaccgcctcggaaaaccggaaaaacccgagagcgtgcataaatcggtacaa
aaggtaaaatcagcagcggctccggccagtctgaaagtaccggttaatccaaatgccatc
cggagcgcggacgtgctgacagccggaacccggatccgccaccgtgtattcggactgggg
aaaatcaccgagcggacagccgaccggatctcggttcagtttgaaaagcagcacagagag
ttttcaattgagatttgtctcagccataagctgttggaaatggctcagtga
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