Pelagerythrobacter marinus: NCF86_00530
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Entry
NCF86_00530 CDS
T08297
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas02020
Two-component system
pmas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCF86_00530
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCF86_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmas03021
]
NCF86_00530
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmas02035
]
NCF86_00530
Transcription machinery [BR:
pmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCF86_00530
Bacterial motility proteins [BR:
pmas02035
]
Flagellar system
Flagellar assembly proteins
Stator
NCF86_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Rv2175c_wHTH
UPF0122
Motif
Other DBs
NCBI-ProteinID:
USA39679
LinkDB
All DBs
Position
complement(91919..92638)
Genome browser
AA seq
239 aa
AA seq
DB search
MKLDHTQFAAAEAYRGNVGDRVTRFLPMVRKLAWHLSGSGGPTIDVDDLMQAGLVALTEC
AQKHDSPSDDGFAAYAKLRVRGAMVDLLRSASPDSRGARSRRRQLETTRAKLRRSLDREP
SAAELAEALEMPVKEFLQYERDLAETRLASLDECYSETDAAFASAEPDAERQVLQQEDRE
SLVAALSALGERHQLVIQLYFVEELNLSEIAAVLDVSVPRVHQLKAAALARMRKAMEAA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgatcatacccagttcgccgcggcggaagcctatcgcggcaacgtcggcgac
cgggtgacccggttcctgccgatggtccgcaagctcgcctggcacctgtcgggcagcggc
ggcccgacgatcgacgtggacgacctgatgcaggccggcctggtggccctgaccgagtgc
gcgcagaagcacgattcgcccagcgacgacggtttcgccgcctatgccaagctgcgcgtg
cgcggggcgatggtcgatctcctgcgcagcgcctcccccgactcgcgcggggcgcgcagc
cgccggcggcagctcgagacaacgcgggcgaaactgcgccgctcgctcgaccgtgaaccc
tcggccgccgagctggccgaagcgctggagatgccggtgaaggaattcctgcagtacgaa
cgcgatcttgccgagacgcggcttgcctcgctcgacgaatgctacagcgagaccgacgcc
gccttcgcctcggccgagccggacgcggagcggcaggtcctgcaacaggaagaccgcgaa
agcctggtcgccgcgctgtcggcgctgggcgagcggcaccagctggtcatccagctctac
ttcgtcgaggaactgaacctgtcggaaatcgccgccgtgctggatgtcagcgtgccgcgg
gtccaccagctcaaggccgccgcgctggcgaggatgcgcaaggcgatggaagcggcgtag
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integrated database retrieval system
