Pelagerythrobacter marinus: NCF86_02690
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Entry
NCF86_02690 CDS
T08297
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmas03016
]
NCF86_02690 (miaB)
Enzymes [BR:
pmas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NCF86_02690 (miaB)
Transfer RNA biogenesis [BR:
pmas03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NCF86_02690 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
CBP_BcsR
Motif
Other DBs
NCBI-ProteinID:
USA40082
LinkDB
All DBs
Position
complement(522657..524009)
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AA seq
450 aa
AA seq
DB search
MRQSAPPRTYRVKSFGCQMNVYDGERMAELLAAKGIAPAPEGEEADLVVLNTCHIREKAA
EKVYSDIGRLAKAGEARGRKPMIAVAGCVAQAEGEEIMARAPAVSMVVGPQAYHRLPAMI
DRAVAGERATDTDMPPIAKFDALPARRTSPPAAFLTVQEGCDKFCTYCVVPYTRGAEISR
PYGDLVAEAHRLVEAGAREITLLGQNVSAWSGEDARGRAIGLAGLIRDLAEIDGLARIRY
TTSHPADMDDALIAAHGEIDKLMPFLHLPVQAGSDRVLKAMNRSHTAESYLRLLERFRAA
RPDLALSGDFIVGFPGETDAEFEETLHLVDAVGYAQAFSFKYSPRPGTPAAAMEGQVPRE
VMDERLQRLQAALNRDQLAFNRASVGRTCAVLVERRGKHPGQWLGKSPWLQSVWFEGEAA
IGDLVTLELAEAGPNSLAGRLPQSAVSATS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagagtgcccctccccggacctacagggtcaagagcttcggctgccagatgaac
gtctacgacggcgagcgcatggccgagctgctggccgcgaaagggatcgcccccgcgccc
gagggcgaggaggcggacctcgtcgtgctcaacacctgccatatccgcgagaaggcggcg
gagaaggtctattccgacatcggccgcctggccaaggcgggcgaggcgcgcgggcgcaag
ccgatgatcgcggtcgccggctgcgtcgcccaggccgaaggcgaggagatcatggcccgc
gccccggcggtgagcatggtcgtcggcccccaggcctaccaccgcctgcccgcgatgatc
gaccgcgcggtcgccggcgagcgcgcgaccgataccgacatgccgccgatcgccaagttc
gatgcccttcccgcccggcgcaccagcccgccggccgcgttcctgacggtgcaggaaggg
tgcgacaagttctgcacctactgcgtcgtgccctatacccgcggcgcggaaatttcgcgc
ccctacggcgacctggtggccgaggcgcaccgcctggtcgaggccggcgcgcgcgaaatc
accctgctcggccagaacgtttcggcctggagcggggaggacgcgcgcggccgcgcgatc
gggctggccgggctgatccgcgacctcgccgaaatcgacggcctcgcccgcatccgctac
accaccagccacccggcagacatggacgacgcgctgatcgccgcccatggcgagatcgac
aagctgatgccgtttctccacctgccggtccaggcgggcagcgaccgcgtgctcaaggcg
atgaaccgcagccacacggccgaaagctacctccgcctgctcgaacgcttccgcgccgcg
cggcccgacctggcgctgtcgggcgatttcatcgtcggcttcccgggcgaaaccgacgcc
gagttcgaagagacgctgcacctggtcgacgcggtcggctatgcccaggccttcagcttc
aagtattcgccgcgccccggcaccccggcggcggcgatggaaggccaggtcccgcgcgag
gtgatggacgagcggctgcagcggctccaggccgcgctcaaccgcgaccagcttgccttc
aaccgcgcctcggtcggccggacctgcgcggtcctcgtcgaacgcaggggcaagcacccg
ggccagtggctgggcaagtccccctggctgcaatcggtctggttcgaaggcgaggcggcg
atcggcgacctcgtgaccctcgagctcgccgaagcgggccccaactcgctcgccggcagg
ctgcctcagtcggcggtttccgccacctcgtaa
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