Pelagerythrobacter marinus: NCF86_03605
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Entry
NCF86_03605 CDS
T08297
Name
(GenBank) exonuclease domain-containing protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCF86_03605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_03605
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCF86_03605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Nab2p_Zf1
Motif
Other DBs
NCBI-ProteinID:
USA40253
LinkDB
All DBs
Position
699903..700601
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AA seq
232 aa
AA seq
DB search
MTIIRVIDFETTGTEPPAQVCEVGICDLDLEAREVRRPFAWLCGVDAMPPEVRAVHHISL
AECAGQSAFAADEMFGEAYGKPDAIAAHNAEFETKFFDAPVPVICTYKAALRVWPEAPSH
SNGALRYWLEDQGKIAPDHALTQPAHRAGPDAYVTAHILLALFDAGATGKEMVAWTKEPR
LLPRCPLGKFRDKPWSEVEAGFLGWMLRQPTMEADLKWNAQREIERRQKAAN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacgattatccgtgtcatcgacttcgagacgaccggcaccgaaccgcccgcgcaggtg
tgcgaggttggcatctgcgatctcgatctggaggcgagggaggtccgccgcccattcgca
tggctctgcggtgtcgacgcgatgccgcctgaggttcgcgcggtccatcatatctcgctg
gccgaatgcgccggccagagcgccttcgctgccgatgagatgttcggcgaggcctacggc
aagcccgatgccatcgccgcccacaacgccgagttcgaaaccaagttcttcgatgcaccg
gttccggtgatctgcacctacaaggccgcgctccgtgtctggcccgaagcgccgagccac
agcaacggcgcgcttcggtactggctcgaggatcagggcaagatcgctcccgatcacgca
ctgacacagcccgcacatcgtgccggccccgacgcctacgtcaccgcacatatcctgctc
gccctcttcgatgccggcgcgaccggcaaggaaatggtcgcgtggacgaaagagccgcgc
ctcctgccgcgctgcccgctcggcaagttccgcgacaagccgtggagcgaggtcgaggcc
ggattcctcggatggatgctgcggcaaccgacgatggaagcggacctgaaatggaacgcg
cagcgcgagatcgagcgccggcagaaggccgcgaactga
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