Pelagerythrobacter marinus: NCF86_04060
Help
Entry
NCF86_04060 CDS
T08297
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCF86_04060 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmas01007
]
NCF86_04060 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmas03016
]
NCF86_04060 (aspS)
03029 Mitochondrial biogenesis [BR:
pmas03029
]
NCF86_04060 (aspS)
Enzymes [BR:
pmas01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NCF86_04060 (aspS)
Amino acid related enzymes [BR:
pmas01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NCF86_04060 (aspS)
Transfer RNA biogenesis [BR:
pmas03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCF86_04060 (aspS)
Prokaryotic type
Other AARSs
NCF86_04060 (aspS)
Mitochondrial biogenesis [BR:
pmas03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NCF86_04060 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
USA40339
LinkDB
All DBs
Position
789364..791184
Genome browser
AA seq
606 aa
AA seq
DB search
MHAYRTHNCAQLTGANVGETVRLSGWIHRKRDHGGVLFVDLRDHYGMTQIVADEDSEALP
VLEGLKLESVVTIDGTVKARAEGTANPNLPTGEIEVFARGVTVQSRAEELPLPVAGEQDY
PEEIRLKYRFVDLRRETMHRNIMLRSQVITSIRRRMTAQGFTEFQTPILGASSPEGARDY
LVPSRLHPGRFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDLRADRSPEFYQLDFEM
SFVTQEDVFQAIEPVLAGVFEEFANGKSVTPAGEFPRIPYAEAMLKYGTDKPDLRNPLII
SDVTGHFETSGFGLFEKIVGSGGRVRVVPAPNTHEKSRKFFDEMNDWARREGFAGLGYVT
RKGGEFGGPIAKNHGTEGMEKLYAELGLGENDGLFFAAGKEKDAAKLAGAARTRVAEELG
LIEEGCFKFCWIVDFPMFEYDEELKKIDFSHNPFSMPQGEMEALENQDPLEIKAWQYDIV
CNGYELSSGAIRNHRPDIMYKAFEIAGYSQADVDENFSGMIEAFKLGAPPHGGSAPGIDR
IVMLLADEPNIREVIAFPLNQRAQDLMMGAPSLVSPRQLRDVHIRTVDAPKPEGAEATRV
DRAGDS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctatcgaacccacaactgcgcacagctgaccggtgcgaacgtcggcgagacg
gttcgcctgtcgggctggatccatcgcaagcgcgatcacgggggcgtgctgttcgtcgac
ctgcgcgatcactacggcatgacccagatcgtcgccgacgaggacagcgaggcgctgccg
gtactggaagggctgaagctggagtcggtcgtcaccatcgacggcacggtcaaggcgcgc
gccgaaggcacggccaacccgaacctgccgaccggggagatcgaggtgtttgcgcgcggc
gtcaccgtccagagccgggccgaggaactgccgctgccggtggcgggcgagcaggactat
cccgaggagatccgtctcaagtatcgcttcgtcgacctgcggcgcgagacaatgcaccgc
aacatcatgctgcgcagccaggtgatcacctcgatccggcggcgcatgacggcacagggc
ttcaccgagttccagaccccgatcctgggcgcttccagccccgagggcgcgcgcgactac
ctcgtgccgagccggctgcatccgggccgtttctacgcgcttccgcaggcgccgcagatg
ttcaagcagctgctgatggtggccggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggacctgcgcgccgatcgcagccccgaattctaccagctcgacttcgaaatg
agcttcgtcacgcaggaagacgtgttccaggcgatcgagccggtcctggccggcgtgttc
gaggaattcgcgaacggcaagagcgtgacgcccgcgggcgagttcccgcgcattccctac
gccgaggcgatgctgaaatacggcaccgacaagcccgacctgcgcaacccgctgatcatc
tcggacgtcaccggccacttcgagacttcgggtttcggcctgttcgagaagatcgtcggc
tccggcggccgggtgcgcgtcgtccccgcgccgaacacgcatgagaagagccgcaagttc
ttcgacgagatgaatgactgggcgcggcgcgagggctttgccggtctcggctacgtcacc
cgcaagggcggcgagttcggcggcccgatcgccaagaaccacggcaccgagggcatggaa
aagctctatgccgagctgggcctgggcgagaacgacggcctgttcttcgccgcgggcaag
gagaaggacgcagccaagctcgccggtgctgcgcgcacccgcgtggccgaggagctgggg
ctgatcgaggaaggctgcttcaagttctgctggatcgtcgatttcccgatgttcgaatac
gacgaggaactgaagaagatcgacttcagccacaatcccttctcgatgccgcagggcgaa
atggaggcgctggagaaccaggacccgcttgagatcaaggcgtggcagtacgacatcgtc
tgcaacggctacgagctgtcctcgggcgcgatccggaaccacaggccggacatcatgtac
aaggccttcgagatcgcggggtacagccaggccgatgtcgacgagaatttctcgggcatg
atcgaggcgttcaagctcggcgcgccgccgcacggtggctccgcccccgggatcgaccgg
atcgtgatgctgctggcggacgagccgaacattcgcgaggtgatcgccttcccgctcaac
cagcgggcgcaggacctgatgatgggcgcgccgagcctcgtcagcccgcgccagctgcgc
gatgtccatatccgcacggtcgatgcgccgaagcccgaaggggcggaggcgacgcgggtg
gaccgggccggggattcctga
DBGET
integrated database retrieval system
