Pelagerythrobacter marinus: NCF86_04125
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Entry
NCF86_04125 CDS
T08297
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmas03036
]
NCF86_04125
Chromosome and associated proteins [BR:
pmas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
NCF86_04125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
USA40349
LinkDB
All DBs
Position
800400..804647
Genome browser
AA seq
1415 aa
AA seq
DB search
MFQSDFFPDRETSSTIPLAFAIGERISRRLADGCHLTRPDISEFFAAQTDVQDWGSAWTI
DDYNNAVEIGALLWLREFSRIDLDTGFHEAAARFDWLDAALPPRHVRSDCQVELQQFSTP
PILGWLMAKAACLAPRDRVLEPSAGNGALALWGDVRGCSLTLNEIDRARGDALAHIFPDA
RLSAHDGELVAELTDGHSSSLNPSVILMNPPFARSRERGVDGRTAMRHLRSALRICAVGG
RLVAILPDSFDAATFVEDQEQASLLLDVRLSGAFSRSGTGIAVRMVVIDKEPLQDASTIT
GEFADLTELNSCLAHLPDRAPLQANVHRLPVRSVATSVSGAASRKPVAPFLTAAAQKSAA
VALNYEALAEPAPVPEQAGIYLPYRPSRVIMDDAPVHPTPLVESVAMGSVAAPVAKARPL
LPVNWQEDKLLSAAQCETLIYACEAFTRDLPGQFRPSQKGTTVELAEDGHSYRQGFFLGD
GTGAGKGRQIAGVMMDRWLSGQRRHIWITKNEALLEDARRDWEALGGLPLDIQPLSRWNL
GSPVTMAEGILFVTYPTLRSGRAEDTRLDQILDWAAEQFEGVIAFDEAHSMANALGSSST
RGNVKGSEQGMAGLRLQNHLPRARVLYASATGASDIANLGYTARLGLWGPETAFPTHQAF
MTEIRAGGVAAMELVARDLKAQGLYLARALSFAGVEYEILEHQLTQAQVRIYDAYADAWA
IIHRNLDQALEATRVVDEDSGDTLNRNAKAAALSIFEGTKQRFFGQLLLSMKLPSLIPAM
EEALGDDHSVVVQLVSTAEAMLDRRLADLSDEEREALDIDLSPREYVIDYLAKSFPVRLM
QVFTDEEGNLRSEAMSDDHGNPVLCSRAIAARDALIEQLCALPPIATALDAIIEHFGTEA
VAEVTGRTRRLVLGRDGQQRLERRSASANVAEAQCFMDGTKRILIFSDAGGTGRSYHADL
DAQNQQRRVHFLLEPGWRADNAIQGLGRTNRTNQASAPLFRPVTTDVKGERRFISTIARR
LDALGALTRGQRQTGGQNLFDPADNLESDYAKDALSRWFHLLYDGKLEAVGFGDFVELTG
LKLENPDGGLSDNLPTIQRWLNRILALPIALQNAIFEEYLGLVEARIEAAREAGTLDLGL
ETVRADSFTVLSDEVLRTDPVSGAETRLVSLEVKRQLRPLRFKRLVRMHEIGSPQAIPLR
NARSGKVALSVPARRLIADDGAVIERRRLLRPLKSANWTLDALGESLWEEVGVTEFSKLW
TQEESAAAASPVTERAHLATGLLLPVWKRLPGEHVRVTRLVAEDGRSIIGREVLDIDLAK
IAETFGLKGVSGPAPAELGKLVLSSGTPQPLASHDALTVKRSLVGGEQRLELTGYAPERL
DWYKTKGCFTEIIRYRTRLFVPVSKASSVLPAIAA
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtcagacttttttccagaccgcgagacatcgagcacaattccgctcgctttc
gcaatcggtgaacgaatttcccggcgacttgcggatggatgccatctcacccgacctgac
atttccgagtttttcgccgctcaaaccgacgtgcaggactggggcagtgcgtggaccatc
gacgactacaacaacgcggtcgagattggcgccttgctctggctccgcgagttctcacgc
atcgacctcgatacaggtttccacgaggctgcagcacggttcgattggctcgatgcagcc
ttaccgcctcgccacgtgcgcagcgactgccaagtcgagctacagcagttttcgacgccg
ccgatccttggatggctgatggccaaagccgcttgcctcgccccgcgcgatcgcgttctc
gaaccgtcagccgggaatggcgctcttgcgctttggggcgacgttcgagggtgctcgctg
acgctgaacgagatcgatcgcgcgcgcggcgatgcgctggcgcatatcttcccagatgcc
cggctatccgcacatgatggcgagttggttgcagaactgaccgatggccatagttccagc
ctcaaccccagcgtcatcctgatgaatcctccctttgctcgaagccgcgagcggggcgtc
gatggccgcacggcaatgcgccacttgcgcagcgcgcttcggatttgcgcggtaggaggt
cgcctcgtggccattctcccggacagctttgacgccgcgacctttgtcgaagaccaggaa
caggcgtcgctgctgctcgacgtccggctgtcgggcgcattctcgcgaagcggaaccggg
atcgcggtcagaatggtcgtcatcgacaaggagcctcttcaggacgcttccacgatcacg
ggggagttcgccgacctcaccgaactgaattcctgcctagcgcatttgcctgatcgtgcg
cctttgcaggccaacgttcatcgccttccggtacgctcggttgcgacctcggtaagcggc
gctgcttcgcgcaagccggttgctcctttcctgactgcagccgcccagaaaagcgcggca
gtcgcgctcaactatgaagccctggcagagcctgcacccgttcccgagcaggcgggcatc
tacctgccttaccgaccgagccgcgtcatcatggacgatgcacctgttcacccgacgccg
ctcgtagaatcggtcgcgatgggctcggtcgcggcaccggtagcgaaagcgcgccctttg
cttcccgtgaactggcaggaggacaaactgctctcggccgcacagtgcgaaacactgatc
tacgcttgcgaggcattcacccgcgaccttcccgggcaattccgtccaagccaaaaagga
acgacggtcgaactcgcggaggacggtcactcctaccggcaaggctttttcctcggtgat
ggtacgggcgcaggcaagggtcgccaaatcgcgggcgtcatgatggatcgctggctctcg
ggccaacgccgtcacatctggatcaccaagaacgaggcactgctcgaagacgcgcgccgc
gactgggaggcgcttggcgggctcccgctcgacatccagccgctctcccgatggaatctc
ggaagtcctgtgacaatggcggagggtatcctgtttgtaacctatccaacgcttcgctcg
ggacgcgccgaggacacaaggctcgatcagatcctcgactgggccgccgagcaattcgag
ggcgtgattgccttcgacgaagcgcattccatggctaatgcgctcggctcttcctcgacc
cgcggcaatgtcaaaggatcggagcaagggatggcaggtctcaggcttcagaaccatctg
ccgcgagcacgtgttctgtacgcttccgctaccggcgcgtctgacattgccaacctcggc
tacacagcccgccttggactgtgggggccagaaaccgcgttcccaacgcatcaggcattc
atgaccgagatccgcgccggcggcgtcgcggcgatggaactcgtcgcccgcgatctcaag
gcacaggggctctaccttgcccgtgcgttgtcctttgccggggtcgaatacgagatcctc
gaacatcagctcacgcaggcgcaggtgcggatctacgatgcctacgccgatgcctgggcg
atcatccaccgcaatctcgaccaagcactcgaagccacaagggtggtcgatgaggacagc
ggcgatacgctcaatcgcaacgccaaggcagcggcgctctcgatattcgaaggcaccaag
cagcgcttctttgggcagcttctgctctcgatgaaactgccgagcctgatcccggcaatg
gaagaggcgctcggcgatgatcattcggtggtggtgcagctggtctcgaccgctgaggcc
atgcttgaccgacgcctggccgatctctcggacgaggagcgagaagcgctcgatatcgat
ctctctccgcgcgaatatgtcatcgactatctcgcgaagagcttcccggtgcgcctgatg
caggtcttcactgacgaggaaggcaatttgcgatccgaagcgatgagcgacgatcacggc
aatcccgttctctgctcgcgtgccatcgctgcgcgcgacgcgctgatcgaacagctttgc
gcccttccgccaatcgccactgcactcgatgccatcatcgagcacttcgggaccgaggct
gtggccgaggtcacaggccgcacgcgcaggttggtcttgggacgcgacggtcagcagcgg
cttgaacgtcgaagcgcaagcgccaacgtcgctgaagcacagtgcttcatggacgggacg
aagcgtattctgattttctcggacgcggggggtacgggccgatcctatcacgccgatctc
gatgcgcagaaccagcagcgccgcgtccattttctcctcgaaccgggctggcgcgcggac
aatgcaatccagggtcttggccggacaaaccgtactaaccaggcttctgcgccgctgttc
cgcccggtcacgaccgatgtgaagggcgaacgccgcttcatctcgacaatcgcgcgaagg
ctcgacgcattgggcgctctcacacgcggccagcgtcagacagggggacagaacctgttc
gaccctgccgacaatctcgaaagcgattatgcgaaggacgcgctctcgcgctggttccac
ctgctttacgatggaaaactcgaggcggttggtttcggggacttcgtcgagctaacaggc
ctcaagctcgagaaccccgatggcggcctgagcgataaccttcccacgatccaacgctgg
ctcaatcgcatacttgcgctcccgatcgcactgcagaacgccatcttcgaggaatatctc
ggacttgtggaagcgcgcatcgaggccgcacgcgaggctggcacgctcgatctgggtttg
gagacggtccgcgccgacagctttacggtgctgtctgatgaagttctccgcacagatcct
gtttcgggcgccgaaacccgcctggtttcgctcgaagtgaaacgccaattgcgcccgctg
cgcttcaaacgtctcgtcaggatgcacgagatcggatccccccaggccattcccctgcgc
aatgcgcgctcgggcaaggtggccctgtcagttccggcgcggcgcctcattgccgatgac
ggcgcggtgatcgaacgccgtcgccttctccgaccgcttaaatccgccaactggacgctc
gacgcgctcggtgaaagcttgtgggaagaggtcggcgtaaccgagttctccaagctctgg
acacaagaagaaagcgccgcagcggcctcgccggtgaccgaacgagcgcatctggcgacg
gggctattactcccggtctggaagcggctgcctggcgagcatgtccgggtgacgcgactt
gtcgccgaggatggcagatcgatcatcgggcgcgaagtcctcgatatcgacttggccaag
attgccgagacgttcggcttgaagggtgtgtccggcccggctccagccgaactcgggaaa
cttgtcctctcgagcggaacgccccagccgcttgccagtcatgatgcactgaccgttaag
cgctctttggtcggcggcgagcaacgacttgagctcactgggtatgcgcctgagcgcctc
gactggtataagaccaagggctgtttcaccgagatcatccgctaccgcacgcgccttttc
gtccccgtgtcgaaggcatcctctgttctcccagccattgcggcctga
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