Pelagerythrobacter marinus: NCF86_04620
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Entry
NCF86_04620 CDS
T08297
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmas03021
]
NCF86_04620
Transcription machinery [BR:
pmas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCF86_04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
KORA
HTH_23
HTH_Tnp_ISL3
HTH_28
DUF134
Motif
Other DBs
NCBI-ProteinID:
USA40444
LinkDB
All DBs
Position
912034..912600
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AA seq
188 aa
AA seq
DB search
MAVVDDTSNEALIGRAIAGDKRAFTALVESEIARLIALATRMLGSPSQAEDVVQDGLASV
WLTRHRLDPSKPIGPYLTTIVLNRCRDRLRRRKVAGFLGLPDGREADAVADDAPNPENVA
GAREQLRLVQAEIGRLPVRLQEALVLVTVEGYSQAEAAELLGTTEKAVETRIYRARTRLK
ERFENFEG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttggcggtggtggatgacacttcgaacgaagcgctgatcgggcgggcgatagccggtgac
aagcgggcgttcacagctctggtcgagagcgagatcgcccgattgatcgcgcttgccacg
cgcatgctgggttcaccctcgcaggccgaagatgtcgtccaggacggtctcgcgtcggtc
tggctgacacggcatcgcctcgatccgagcaagcccatcggcccctatttgacgacaatc
gtcctcaaccggtgccgcgacaggctccgccggaggaaagttgcgggcttccttggtttg
ccggacgggcgggaagccgacgccgttgccgacgatgcccccaatcccgaaaatgttgcc
ggagcccgcgaacagctgcggctggtccaggcagaaatcgggcgcttgccggtgcggctg
caagaggcgctcgtgctggtcactgtcgaggggtacagccaggccgaggctgccgagctg
ctcggcaccacggagaaggccgtcgagacgcgcatctaccgcgcgcgcacccggctgaag
gagcggttcgaaaactttgaggggtag
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