Pelagerythrobacter marinus: NCF86_05515
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Entry
NCF86_05515 CDS
T08297
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_05515 (radA)
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCF86_05515 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
AAA
GvpD_P-loop
Lon_C
RecA
nSTAND3
MCM
Glyco_hydro2_C5
AAA_5
Zn_ribbon_6
AAA_24
SLFN-g3_helicase
DUF7129
DUF7125
Rad51
NACHT
DUF7573
NTPase_1
zf-RING_10
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
USA40612
LinkDB
All DBs
Position
1098871..1100244
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AA seq
457 aa
AA seq
DB search
MAKTKKRYVCQACGSVSHRWQGQCPDCAEWNTLVEDVPATVFSQKHDLSSGGRRVAFEPL
DAPGEALRRRTTGLAEFDRALGGGLVPGSAILMGGDPGIGKSTLLLQAAARIAAAGAEAV
YVSGEEAAGQVRLRAARLGLADAPIKLAAATSVRDILTTLNGMAAPALLVIDSIQTMYSD
TIEGAPGTVSQVRGCAFELIRYAKENGVALVLVGHVTKDGNIAGPRVLEHMVDVVMSFEG
ERSHQYRILRSLKNRFGPVDEIGVFAMAGQGLEEVANPSMLFLSGRDEPLAGSSVFPALE
GTRPVLVEVQALIVRLQSGATPRRAVVGWDSGRLAMLLAVLEARCGLNFSSAEVYLNIAG
GYRLTDPAADLAVAAALVSALADRPLPARSVWFGEVSLAGEVRPVAHSAVRLREAAKLGF
SSSFGPHDDTAAGAHDGVDYRAIGQLANLVDRIAATP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccaagaaacgttacgtgtgccaggcctgcggctcggtttcgcaccggtgg
caggggcagtgccccgattgcgccgaatggaacacactggtcgaggatgtcccggccacg
gtcttctcgcagaagcacgacttgtcgagcggcggacgccgggtggccttcgaaccgctc
gacgcgccgggcgaggcgctgcgccggcgcacgaccgggctggccgagttcgaccgcgcc
ctgggcggcggcctggtgcccggttccgccatcctgatgggcggcgatccgggcatcggc
aagtccaccctgctgctccaggcggccgcgcggatcgccgctgccggggcggaggcggtc
tacgtcagcggggaggaagccgccgggcaggtgcgcctgcgcgccgcgcgcctggggctg
gccgacgcgccgatcaagctcgccgccgcgacttcggtgcgcgatatcctgacgacgttg
aacggcatggccgcgcccgcgctgctggtgatcgattcgatccagacgatgtattcggac
acgatcgaaggggcgccgggcacggtcagccaggtccgcggctgcgcgttcgaactgatc
cgctatgccaaggagaacggcgtcgcgctggtcctggtggggcacgtgaccaaggacggc
aacatcgccggcccgcgcgtgctggagcacatggtggacgtggtgatgagcttcgaaggc
gaacgcagccaccagtaccgcatcctgcgcagcctgaagaaccgcttcggcccggtggac
gagatcggcgtcttcgccatggcggggcaggggctggaggaagtggccaacccctcgatg
ctgttcctttccggccgcgacgagccgcttgccggcagttcggtcttccccgcgctggaa
gggacgcggccggtcctggtcgaggtccaggcgctgatcgtgcggttgcagagcggcgcg
accccgcggcgcgcggtggtcgggtgggacagcgggcgcctggccatgctcctcgccgtg
ctggaggcgcgctgcgggctgaacttcagctcggcagaggtctatctcaacatcgcgggc
ggataccgcctgaccgatccggcggccgacctcgccgttgccgcggcgctcgtttcggcg
ctggcggaccggccgctgccggcgcgcagcgtgtggttcggcgaagtctcgctggcaggc
gaagtccgccccgtcgcgcattcggccgtgcgcctgcgcgaggcggcgaagctcgggttc
agttccagtttcggcccgcacgacgataccgccgcgggcgcgcacgacggggttgattac
cgggcgatcgggcaactcgccaatctcgttgaccggatcgcggcaaccccctaa
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