KEGG   Pelagerythrobacter marinus: NCF86_05725
Entry
NCF86_05725       CDS       T08297                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
pmas  Pelagerythrobacter marinus
Pathway
pmas02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmas00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NCF86_05725
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pmas02022]
    NCF86_05725
Two-component system [BR:pmas02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   NCF86_05725
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 Response_reg HTH_8 AAA_5 AAA_16 AAA HTH_30 AAA_2 Mg_chelatase TIP49 AAA_30 Xre-like-HTH MCM IIGP AAA_3 AAA_19 Parvo_NS1
Other DBs
NCBI-ProteinID: USA40651
LinkDB
Position
complement(1140316..1141725)
AA seq 469 aa
MNGKVLLVEDDASIATVIRSALEDEGFAVDRCESIAARDRALASDRYDVMLTDVMLADGD
GIASIDSVRAACPQMPLIVLSAQNTLDTAVRASDTGAFEYFPKPFDLDDLVRAVVQAAGS
GDKRGEEAEAGDGLPLVGRSQAMQAVYRMITRVLRNDLTVLVLGESGTGKELVAEAIHQL
GHRKSGPFVAVNAAAIPADLIESELFGHEKGAFTGAIAQAIGKFEQANGGTLFLDEIGDM
PIEAQTRLLRALQSGRIRRVGGRQEIAVDVRIIAATNRDLKPMIAAGQFREDLYYRLNVV
PIVLPPLRDRVEDIEALAKHFLGLAAREGLPERRIDRPALALLEQQPWRGNVRELQNAVY
RLALMARDDVIDAGTVTAVLGDPAEAVMRGRDDALGAALAAWLADNAPAHGTLYHRAVSA
FERPLFEYALGQTGGNQLRAAKLLGINRNTLRKRLGELQINADSFARAE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaatggcaaggtcctgctggtggaggacgacgcctccatcgccacggtgatccgctcc
gcgctggaggacgaggggttcgcggtggaccggtgcgagagcatcgccgcgcgcgaccgg
gcgctggcgtcggaccgttacgacgtcatgctgaccgatgtcatgctggccgacggcgac
ggcattgcctcgatcgacagcgtgcgggcggcctgcccgcagatgccgctgatcgtcctt
tcggcgcagaacacgctcgataccgcggtccgcgcgagcgacaccggcgccttcgagtac
tttcccaagcccttcgacctcgacgatctcgtgcgcgcggtcgtccaggccgcggggtcg
ggcgacaagcgcggggaggaggccgaggccggcgacggcttgccgctggtcggccgcagc
caggcgatgcaggccgtataccgcatgatcacgcgggtcctgcgcaacgacctgaccgtg
ctggtcctgggcgaatcgggcaccggcaaggaactggtggccgaggcgatccaccagctg
ggccatcgcaagtccggccccttcgtcgcggtcaacgccgccgccattcccgccgacctg
atcgaaagcgagctgttcgggcacgagaagggcgcctttaccggcgcgatcgcccaggcc
atcggcaagttcgaacaggccaatggcggcacgctgttcctcgacgaaatcggcgacatg
ccgatcgaggcgcagacgcgcctgctgcgcgcactgcaatccggccgcatccggcgggtc
ggcgggcggcaggaaatcgcggtggacgtgcggatcatcgcggcgaccaaccgcgacctc
aagccgatgatcgcggcggggcagttccgcgaagacctctattaccggctgaacgtcgtg
ccgatcgtgctgccgccgctgcgtgaccgggtggaggacatcgaggcgctggccaagcat
ttcctggggctcgccgcgcgcgagggcctgcccgaacggcggatcgaccgcccggcgctc
gcgctgctggaacagcagccgtggcggggcaacgtgcgcgagttgcagaacgcggtctat
cgcctggcgctgatggcgcgcgacgacgtgatcgacgcgggcacggtcaccgcggtactt
ggcgacccggcggaagcggtcatgcgcgggcgcgacgacgcgctgggcgccgccctggcg
gcgtggctggctgacaatgcgccggcccacggaacgctctatcaccgcgccgtctccgcc
ttcgagcggccgttgttcgaatatgccctcggccagaccggcggaaaccagttgcgggcg
gccaagctgctgggcatcaatcgcaacaccttgcgcaagcggctgggcgagttgcagatc
aacgccgacagcttcgcgcgcgccgaatag

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