KEGG   Pelagerythrobacter marinus: NCF86_06230
Entry
NCF86_06230       CDS       T08297                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmas  Pelagerythrobacter marinus
Pathway
pmas00300  Lysine biosynthesis
pmas00470  D-Amino acid metabolism
pmas01100  Metabolic pathways
pmas01110  Biosynthesis of secondary metabolites
pmas01120  Microbial metabolism in diverse environments
pmas01230  Biosynthesis of amino acids
Module
pmas_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmas00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCF86_06230 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCF86_06230 (dapF)
Enzymes [BR:pmas01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCF86_06230 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: USA40744
LinkDB
Position
1242205..1243014
AA seq 269 aa
MRVPFIKMHGLGNDFVVLDARRDTLPAMTGALAARIADRRTGIGCDQLILLEPSDCADFR
MRIVNADGSEVGACGNATRAVALLHGAPARIETDGGLLAAEPREGGATVDMGRPRFGWDE
IPLAYAMDTLSMPVGWDGLETPAAVNVGNPHAVFFVPDCDAVVLESLGPRIENDPLFPER
VNVNVATVESRSRIRLRVWERGAGLTRACGTGACATAVAAMRRGLADRAVEVVLPGGPLD
IRWGEDGRIAMTGPAREAYRGTFEWDDFA
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcgcgtaccgttcatcaagatgcatggcctgggcaacgatttcgtcgtgctcgacgcg
cggcgcgataccctgccggcgatgacgggcgcgctggccgcgcgcatcgcggaccggcgc
accgggatcggctgcgaccagctcatcctgctcgaaccttccgattgcgccgatttccgg
atgcggatcgtcaatgccgacggcagcgaagtcggcgcctgcggcaatgcgacccgcgcg
gttgccctgctccacggcgccccggcacggatcgagaccgacgggggcctgctcgcggcc
gagccgcgcgagggcggggccacggtggacatgggccggccccggttcggctgggacgag
attcccctcgcctacgcgatggacaccctgtcgatgccggtcggctgggacgggctggaa
acgcccgccgcggtgaacgtgggcaacccccacgcggtcttcttcgtccccgattgtgac
gcggtggtgctggaatcgcttggcccccggatcgagaacgacccgctgtttcccgagcga
gtcaacgtcaacgtcgccacggtcgaatcgcgcagccgcattcgcctgcgggtgtgggaa
cgcggcgcggggctgacgcgggcctgcggcaccggcgcctgcgccaccgcggtcgcggcg
atgcgccgggggctggccgaccgcgcggtcgaggtggtcctgcccggcggcccgctggat
atccgctggggcgaagacggccgcatcgcgatgaccgggccggcgcgcgaggcctatcgc
ggcacgttcgaatgggacgatttcgcatga

DBGET integrated database retrieval system