Pelagerythrobacter marinus: NCF86_06395
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Entry
NCF86_06395 CDS
T08297
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmas03032
]
NCF86_06395
03036 Chromosome and associated proteins [BR:
pmas03036
]
NCF86_06395
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_06395
DNA replication proteins [BR:
pmas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCF86_06395
Chromosome and associated proteins [BR:
pmas03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCF86_06395
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCF86_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
VWA_3
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
USA40772
LinkDB
All DBs
Position
complement(1272309..1272581)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADSSGLSKSDSANAVEGVFDAITKALSKGDEVRLVGFGTFSVARRKASTG
RNPRTGEPMTIKASNQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgatctgatcagcgccgtcgcggattccagcgggctttccaagagcgat
agcgccaacgcggtcgagggtgttttcgatgccattaccaaggcgctgtcgaagggcgac
gaagtgcggctggtcgggttcgggactttctccgtggcgcggcgcaaggcctcgaccggg
cgcaacccgcgcaccggcgagccgatgacgatcaaggcgtcgaaccagccgaagttcaag
gccggcaagggcctgaaggacagcgtcaactga
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integrated database retrieval system
