Pelagerythrobacter marinus: NCF86_06415
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Entry
NCF86_06415 CDS
T08297
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03030
DNA replication
pmas03430
Mismatch repair
pmas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCF86_06415
03430 Mismatch repair
NCF86_06415
03440 Homologous recombination
NCF86_06415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmas03032
]
NCF86_06415
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_06415
Enzymes [BR:
pmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCF86_06415
DNA replication proteins [BR:
pmas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCF86_06415
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCF86_06415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_30
AAA_19
AAA_14
AAA_assoc_2
Cdc6_lid
AAA_18
AAA_24
PIF1
AAA_2
Glyco_tranf_2_5
DUF815
Motif
Other DBs
NCBI-ProteinID:
USA40776
LinkDB
All DBs
Position
complement(1276846..1278666)
Genome browser
AA seq
606 aa
AA seq
DB search
MGDSPTDAGNGAHDLPWDTGEDAAAKPSAAELEAEGQGAMFGDAPADPPVDSPPAQPAEP
AAAKETPPPANQPYRVLARKYRPQTFSQLIGQEPMVRTLANAIERDRLAHAFLMTGVRGV
GKTSTARLVAKALNCIGPDGQGGPTIDPCGVCEPCRAIAEGRHIDVIEMDAASHTGVDDV
REIIEAVRYAAVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPAHVKFLFATTEVDKLPV
TVLSRTQRFDLRRIPAELLQAHFAWVCEQEGVAAEAEALAMIAAAAEGSVRDGLSILDQA
IAHADLGEDGQVTADRVRDMLGLADKGAQRRLLGTILEGDARALLDGVSDQYALGVEPLA
LMRGLMDLVHRITVAQIGQAEPDAPSAEERAALAEWAARLSAGQLHRLWQLLLKGYDEVR
QAPDPLVSAQMALLRVLHAADLPDPGKLAKKLDDMAASGVAPAAGDAAAPSGTAPAAAGA
IDWQALVEQVDAAGALRVAQTMRDWVRPVEVAQGRLVYALAPGFVGDPAADFRDTLYKLT
GSRWDVEQRETGGEPSLREREEAAKAEAQAKMRAHPLVEAAFAAFPEAELVEDAEIQPAG
RQAWGR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcaccgacagacgcgggaaacggcgcgcacgacctgccctgggatacgggg
gaggacgcggcggcgaagccgagcgcggccgagctggaggccgaagggcagggcgcgatg
ttcggcgatgcgccggccgatccgcccgtcgattctcccccagcgcagccggcggagcct
gccgccgcgaaagaaacgccgcccccggcgaaccagccctatcgcgtgctggcgcgcaag
tatcgcccgcagaccttttcccagctgatcgggcaggaaccgatggtgcgcacgctcgcc
aacgcgatcgagcgcgaccggctcgcccatgccttcctgatgaccggcgtgcgcggggtg
ggcaagacatcgaccgcgcggctggtggccaaggcgctcaactgcatcggccccgacggg
cagggcgggccgacgatcgacccgtgcggcgtgtgcgagccgtgccgcgcgatcgccgag
gggcgccatatcgacgtgatcgagatggacgccgcgagccataccggcgtggacgacgtg
cgcgagatcatcgaggcggtccgctacgccgcggtcagcgcgcgctacaagatctatatc
atcgacgaagttcacatgttgtctcgcaatgctttcaatgccttgctgaagacacttgag
gaaccgcccgcgcatgtgaagttcctcttcgcgacgaccgaagtggacaagctgccggtc
accgtcctcagccggacgcagcggttcgacttgcgccgcatcccggccgaactgctccag
gcgcatttcgcctgggtctgcgaacaggaaggggtcgcggccgaggccgaggccctggcg
atgatcgccgccgcggccgaaggctcggtgcgcgacgggctctcgatcctcgaccaggcg
atcgcccatgccgacctgggcgaagacgggcaggtcacggcggatcgggtgcgcgacatg
ctgggcctggccgacaagggcgcgcagcgccgcctgctcggcacgatcctggaaggcgat
gcgcgggccctgctcgacggcgtatcggaccagtacgcgctcggcgtcgaaccgctggcg
ctgatgcgcgggctgatggaccttgtccaccggatcacggtggcccagatcggccaggcg
gagcccgacgcgccgagcgcggaggaacgggccgcgctggccgaatgggcggcgcgcctt
tccgccggccagcttcaccgcctgtggcagctcctgctcaagggctacgacgaagtgcgc
caggcgcccgatccgctggtctcggcgcagatggcgctcctgcgcgtgctccacgccgcc
gacctgcccgatccgggcaagctggcgaagaagctggacgacatggccgccagcggcgtc
gcccctgctgccggcgacgcggccgccccctccggcaccgccccggccgccgccggcgcg
atcgactggcaggcgctggtcgagcaggtcgatgccgccggcgcgctgcgcgtggcgcag
acgatgcgcgactgggtccgcccggtggaggtggcgcagggccggctggtctatgccctc
gcgcccggcttcgtcggcgatccggcggccgatttccgcgatacgctctacaagctcacc
ggcagccggtgggacgtcgaacagcgcgagaccggcggcgagccgagcttgcgcgagcgc
gaggaagcggcgaaagcggaagctcaggcgaaaatgcgcgcgcacccgctggtcgaggcg
gccttcgcggctttccccgaggccgagctggtcgaggatgccgagatccagcccgccggc
cgccaggcctggggccgctga
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