Pelagerythrobacter marinus: NCF86_07105
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Entry
NCF86_07105 CDS
T08297
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_07105
Enzymes [BR:
pmas01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCF86_07105
DNA repair and recombination proteins [BR:
pmas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCF86_07105
Prokaryotic type
NCF86_07105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
USA40901
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All DBs
Position
complement(1411336..1412715)
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AA seq
459 aa
AA seq
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MTSPQIVWLRRDLRLADQPAFHAAAQAGPVIPVFVLDEDAPGDHAPGGAARWWLHHSLDS
LGRSLARHRSRIVLRRGDAVQHLATIAQAAGAGAVHAVRHYEPWWQEAESRLGAELDLVL
HDGNYLAPPGFVTTGSGDPYKIYTPFAKAMLAEMPPRACLPEPARIALPDSWPDSDALDD
WNLLPTAPDWAGGLREAWDVGEAAAHDRLERWAGAVSTYHESRDMPSEDGSSRLSPHLHW
GEISPAQVWHALKGRRGEGWATFAGELLWRDYAQTVVCQFPDYGRASHREGLDDIWRNPN
RGPLIAEDLRAWQRGRTGYPLVDAGMRQLWQTGWMHNRARMVCASFLVKHLLIDWTFGER
WFWDCLVDADYANNAVNWQWVAGTGVDSNMFPRIMAPLRQSEKFDAAGYIRRHVPELADL
PDGQIHDPPDEARGAYPAKIIGHREARERALEAYRAAKA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgccgcagatcgtgtggctgcggcgcgacttgcgcctggccgaccagcccgcc
ttccacgcggcggcgcaggcggggccggtcatcccggtcttcgtgctcgacgaggatgcc
ccgggcgaccatgcccccggcggcgcggcgcgctggtggctgcaccactcgctcgacagc
ctcgggcggtcgctcgcgcggcaccgctcgcgaatcgtcctgcgccgcggcgacgcggtc
cagcacctggccacgatcgcgcaggcggccggggcgggcgccgtccacgccgtgcgccat
tacgagccgtggtggcaggaagcggaaagccgcctgggggcggaactcgacctggtcctg
cacgatggcaactacctcgctcctcccgggttcgtgaccacgggttcgggcgatccctac
aagatctacacgcctttcgcgaaggccatgctggccgagatgccgccgcgcgcctgcctg
cccgaaccggcgcggatcgcgctgccggatagctggcccgacagcgacgcgctggacgac
tggaacctcctgcccaccgcgcccgactgggcgggcgggctgcgcgaggcctgggacgtc
ggcgaagcggccgcgcacgaccggctcgagcgctgggccggcgcggtttccacctatcac
gagagccgcgacatgccttccgaggacggttcctcgcgcctctcgccgcacttgcactgg
ggggagatctcccccgcgcaggtctggcacgcgctcaagggccgccggggggagggctgg
gcgacgttcgccggggaactgctctggcgcgactatgcccagaccgtggtctgccagttc
cccgactatggccgggccagccaccgtgaagggctggatgatatctggcgcaacccgaac
cgcgggcccctgatcgcggaggacttgcgcgcgtggcagcgggggcggaccggctacccg
ctggtcgatgccgggatgcgccagctgtggcagaccggctggatgcacaaccgcgcgcgg
atggtctgcgccagcttcctggtgaagcacctgctgatcgactggactttcggcgaacgc
tggttctgggattgcctggtcgatgccgattacgccaacaacgcggtcaactggcaatgg
gtcgccggcacgggggtggacagcaacatgttcccccgcatcatggccccgttgcgccag
agcgagaagttcgacgcagccggctatatccgccgccatgtgcccgaactggccgatctt
cccgacggccagatccacgatccgcccgacgaagcgcgcggcgcctatccggcgaagatc
atcggccatcgcgaagcgcgcgagcgggcgctggaggcctatcgcgcggcgaaagcctag
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