Pelagerythrobacter marinus: NCF86_07260
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Entry
NCF86_07260 CDS
T08297
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCF86_07260 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_07260 (uvrA)
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCF86_07260 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCF86_07260 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_25
ATPase
AAA_21
BCA_ABC_TP_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
USA40930
LinkDB
All DBs
Position
complement(1443281..1446220)
Genome browser
AA seq
979 aa
AA seq
DB search
MALTQISVRGAREHNLKGIDIDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVP
YSPATGLPIEAQTVSNMVDRVMGLPEGTRLYLLAPVVRGRKGEYRKELAEWQKAGFTRVR
IDGELYAIEEAPALDKKFKHDIEVVVDRLAVKEGLETRLAESFETALKLADGLAYVDLAD
GAVPGREGEGNTAGGAMKGAGIPANRIVFSEKFSCPVSGFTLEEVEPRLFSFNAPQGACP
TCDGIGEKQLFDPRLVVPNEALSLKKGAVVPWAKSNPPSPYYMQVLASLAKEYGFDLTTP
WEEFDQEIRDIILHGTKGRAIPLTFKDGRKQYTVNKPFEGVIGNLNRRMLQTESAWMREE
LAKFQTAQPCETCGGKRLNPKALSVKIPGPSGPTDIATPTQMSVADAKAWFLGLDEHLTE
QQAQIAKAILKEINERLGFLDNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLY
VLDEPSIGLHQRDNDRLLETLKRLRDLGNTVIVVEHDEDAIRAADYVVDLGPGAGVHGGE
VVAEGTLKQVLRNKKSLTAAYLTGRREIAVPATRRKGNGHQLTVHGARANNLRDVTASIP
LGTFTCVTGVSGSGKSSFTIDTLYASAARELNGARIVAGAHDKVTGLEYCDKVIEIDQSP
IGRTPRSNPATYTGAFTQIRDWFAGLPESQARGYKPGRFSFNVKGGRCEACQGDGLIKIE
MHFLPDVYVTCEQCDGKRYNRETLEVKFKGHSIADVLDMTIEDAEEFFKAVPPIRDKMHM
LNEVGLGYVKVGQQATTLSGGEAQRVKLAKELAKRSTGQTLYILDEPTTGLHFEDVRKLL
EVLHRLVDQGNSVVVIEHNLDVIKTADHVLDLGPGGGVRGGEVVAEGTPEEVAAVEGSFT
GQYLRPMLDRATRNEPAPV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcacttacccagatttccgtccgcggcgcgcgcgagcataacctcaagggcatcgat
atcgatctgccgcgcgacagcctgatcgtgatcaccggcctttccggctcgggcaagtcg
agcctcgccttcgacacgatctacgccgaggggcagcggcgctacgtcgaatcgctcagc
gcctatgcgcgccagttcctcgagatgatgcagaagcccgatgtcgagcatatcgacggg
ctctcacccgcgatctcgatcgagcagaagaccaccagccgcaacccacgctcgaccgtc
gccaccgttaccgagatctacgactacatgcgcctgctgtgggcgcgcgtgggcgtgccc
tattcgcccgccaccgggctgccgatcgaggcgcagaccgtctccaacatggtggaccgg
gtcatgggcctgcccgaaggcacgcggctctacctgctcgcgccggtggtgcgcgggcgc
aagggcgaatatcgcaaggaactggccgaatggcagaaggcgggcttcacccgcgtgcgg
atcgacggcgaactctacgcgatcgaggaagcgcccgcgctcgacaagaagttcaagcac
gacatcgaggtggtggtcgaccggctggcggtgaaggaggggctggaaacccgcctcgcc
gagagcttcgaaaccgcgctcaagctcgccgatggcctcgcctatgtcgatctcgccgat
ggcgcggtgcccgggcgcgagggcgaggggaacaccgccggcggcgcgatgaagggcgcc
ggcatccccgccaaccgcatcgtcttctccgagaaattctcctgcccggtcagcggtttc
acgctcgaggaggtcgaaccgcggctgttctccttcaacgcgccgcagggcgcctgcccg
acttgcgacggcatcggcgagaagcagctgttcgacccgcggctggtcgtccccaacgag
gcgctcagcctcaagaagggcgcggtggtgccctgggccaagtccaacccgccatcgccc
tattacatgcaggtgctcgcctccctcgcgaaggaatacgggttcgacctcaccaccccg
tgggaggagttcgaccaggaaatccgcgacatcatcctccacggcacaaaaggccgcgcg
atcccgctcaccttcaaggacgggcgcaagcagtacacggtcaacaagccgttcgaaggc
gtgatcggcaatctcaaccgccgcatgctccagaccgagagcgcgtggatgcgcgaggag
ctggccaagttccagaccgcgcagccgtgcgagacctgcggcggcaagcggctcaacccc
aaggcgctcagcgtcaagatccccggcccctccggcccgaccgacatcgccacccccacg
cagatgagcgtcgccgatgccaaggcgtggttcctcgggctcgacgagcacctgacggaa
cagcaggcgcagatcgcgaaggccatcctcaaggaaatcaacgagcggctgggcttcctc
gacaatgtcgggctcgactacctcaacctcgaccgcacttcgggcacgctctcgggcggc
gagagccagcgcatccgcctcgccagccagatcggcagcgggctctcgggcgtgctctac
gtgctcgacgaacccagcatcggcctccaccagcgcgacaacgaccggctgctcgaaacg
ctgaagcgcctgcgcgatctcggcaacaccgtgatcgtggtcgagcacgatgaagacgcg
atccgcgccgccgattacgtggtcgatctcggccccggcgcgggggtccacgggggcgag
gtggtcgccgaaggcacgctgaagcaggtgctcagaaacaagaaatcgctcaccgccgcc
tatctcaccggccgccgcgaaatcgcggtcccggccacgcggcgcaagggcaatggccac
cagctcaccgtccacggcgcgcgcgcgaacaacctgcgcgacgtcaccgcctcgatcccg
ctgggcactttcacctgcgtcaccggcgtctcgggctcgggcaagtcgagcttcaccatc
gacacgctctacgcctcagccgcgcgcgaattgaacggcgcgcgcatcgtcgcgggcgcg
cacgacaaggtcaccgggctcgaatattgcgacaaggtgatcgagatcgaccagtcgccc
atcggccgcaccccgcgctccaacccggccacctacaccggcgccttcacccagatccgc
gactggttcgcgggcctccccgaaagccaggcgcgcggctacaagcccgggcgcttcagc
ttcaacgtcaagggcggccgctgcgaggcgtgccagggcgacggcctcatcaagatcgag
atgcacttcctgcccgacgtctacgtcacctgcgaacaatgcgacggcaagcgctacaac
cgcgaaacgctggaggtgaagttcaagggccactcgatcgccgacgtgctcgacatgacg
atcgaggatgcggaggaattcttcaaggcggtcccgccgatccgcgacaagatgcacatg
ctgaacgaggtcggcctcggctacgtcaaggtcggccagcaggcgaccacgctgtcgggc
ggcgaggcgcagcgcgtcaagctcgccaaggaactcgccaagcgcagcaccgggcagacg
ctctacatcttggacgagcccaccacgggcctccatttcgaggacgtccgcaagctcctc
gaagtgctccaccggctggtcgaccaggggaactcggtcgtggtgatcgagcacaacctc
gacgtgatcaagaccgcggaccatgtgcttgatttggggccgggcggtggcgtgcgcggg
ggtgaggttgtggccgaagggacgccggaggaggttgcagcggtcgaaggtagctttacg
gggcagtatctgcgtccgatgctggatcgcgcaacccggaacgagcctgccccggtgtag
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