Pelagerythrobacter marinus: NCF86_07620
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Entry
NCF86_07620 CDS
T08297
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03420
Nucleotide excision repair
pmas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCF86_07620
03430 Mismatch repair
NCF86_07620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_07620
Enzymes [BR:
pmas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCF86_07620
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCF86_07620
MMR (mismatch excision repair)
Other MMR factors
NCF86_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF2067
DUF3553
Motif
Other DBs
NCBI-ProteinID:
USA41084
LinkDB
All DBs
Position
1512250..1514439
Genome browser
AA seq
729 aa
AA seq
DB search
MLAGAGTGKTAALTARLAHLVATRRAWPSEILCVTFTNKAAREMRERVAHHLGEAVEGMP
WLGTFHSIGAKMLRRHAELVGLQSNYTIIDTDDQLRLLKQLIADNDLDEKRWPARQLAGL
IDRWKNKGLNPEDLDAVENEGYANGRGQQFYRLYQDRLKALNACDFGDLLLHMLNVFRRE
RDVLAHYQQRFKYILVDEYQDTNQVQYLWLRLLAQERKNICVVGDDDQSIYSWRGAEVAN
ILRFEKDFPGAHVVRLEQNYRSTPHILGAASGLIDANSQRLGKSLWTEVDGGDKVRVIGV
WDAPEEARRVGEEIERLEREGAPLDRIAILVRAQYQTREFEDRFIQIGLNYRIVGGFRFY
ERAEIRDALAYLRVIAQPQDDLAFERIYNQPKRGLGAKTLEKMHQHARRTGLPLAAATLQ
LADSDELPARAANTIGGLMRQFLAWREQAEKATPAELLRTVLEETGYNAMLQAEKTAEAS
GRLENLSELARAMEEYETLGDFLEHVSLVMDNEAGDDSEKVTIMTIHAAKGLEFDNVFLP
GWEEGVFPSQRALDEGGLASLEEERRLAYVAITRARRRCTILHAANRRIYGQWTSSIPSR
FVGELPADHVEEETTLTGGASLWRAGMSEREDPFAHVATSRPERSGSRGPGWQRALSTGY
DATPRRVRETTRSAASFAAKPRTDVTVGQRVFHDKFGYGTVTGQEGNRLEIAFEQAGTKR
VIDSFVTLA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgggggccggcacgggcaagaccgcggcgcttaccgcgcgccttgcacatctc
gtcgcgacgaggcgcgcctggccgagcgagatcctctgcgtcaccttcaccaacaaggcc
gcgcgtgaaatgcgcgagcgcgtggcccaccacctgggcgaagccgtcgaggggatgccc
tggctcggcacgttccattcgatcggcgcgaagatgctgcgccgccatgccgagctggtg
ggcctgcaatcgaactacacgatcatcgacaccgacgaccagttgcgcctgctcaagcag
ttgatcgcggacaacgacctcgatgaaaagcgctggcccgcgcgccagctcgccggcctg
atcgaccggtggaagaacaaggggctgaaccccgaggatctcgacgcggtggagaacgag
ggttacgccaacggccgcgggcagcagttctatcgcctctaccaggaccggctgaaagcg
ctgaacgcctgcgacttcggcgacctgctgctgcacatgctcaacgtcttccggcgcgaa
cgcgacgtgctcgcccattaccagcagcgcttcaagtatatcctggtggacgagtaccag
gataccaaccaggtccagtacctgtggctgcgccttctcgcgcaggagcgcaagaacatc
tgcgtcgtgggcgacgacgaccagtcgatctattcctggcgcggggccgaagtcgccaat
atcctgcgcttcgagaaggattttccgggcgcccacgtcgtccggctggaacagaactat
cgctccaccccgcatatcctcggggccgcctcgggcctgatcgatgccaatagccagcgg
ctgggcaagagcctgtggaccgaggtggacggcggcgacaaggtccgcgtgatcggcgtg
tgggacgcgcccgaggaagcgcgccgcgtgggggaagagatcgagcggctggagcgcgaa
ggcgccccgctcgaccgtatcgcgatcctcgtcagggcccagtaccagacgcgcgagttc
gaagaccgcttcatccagatcggcctgaactaccgcatcgtcggcggtttccggttctac
gagcgggcggagatccgcgacgcactggcctatctgcgggtcatcgcccagccgcaggac
gatctcgccttcgaacggatctacaaccagcccaaacgcgggctcggcgccaagacgctg
gaaaagatgcaccagcacgcgcgccgcacgggcctgccgctggccgcggcaacgctgcaa
ctggccgacagcgacgaattgccggcccgcgcggcgaacacgatcggcgggctgatgcgc
cagttcctcgcctggcgcgaacaggcggagaaagcgaccccggccgagcttctgcgcacc
gtgctggaggaaaccggctacaacgccatgctccaggccgagaagaccgccgaggcatcg
ggccggctggagaacctgtccgaactcgcccgcgcgatggaggaatacgagacgctgggc
gacttcctcgaacacgtcagcctcgtgatggacaacgaggccggcgacgacagcgagaaa
gtcaccatcatgacgatccacgcggccaaggggctggagttcgacaatgtcttcctgccc
ggctgggaagagggggtctttccctcgcagcgcgcgctcgacgaaggcggcctcgccagc
ctggaggaggaacgccggctggcctatgtcgcgatcacccgcgcccggcggcgctgcacg
atcctgcacgcggccaaccggcggatctacggccagtggaccagcagcataccgagccgt
ttcgttggcgagttgccggccgaccatgtggaggaggaaacgacgctgaccgggggcgca
tcgctatggcgcgcgggcatgagcgagcgcgaagacccgttcgcccacgtcgcgacgagc
cggcccgagcgctcgggcagccgcggccccggctggcagcgggcgctttcgaccggttac
gacgcgacgccgcggcgggtgcgcgaaaccacccgcagcgccgccagcttcgccgccaag
ccgcgcaccgacgtgacggtcggccagcgcgtgttccacgacaagttcggctatggcacg
gtgacggggcaggaaggcaaccggctcgaaatcgcgttcgaacaggccgggacgaaacgg
gtcatcgacagcttcgtcacgctcgcctga
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