Pelagerythrobacter marinus: NCF86_07650
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Entry
NCF86_07650 CDS
T08297
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmas03019
]
NCF86_07650 (rapZ)
Messenger RNA biogenesis [BR:
pmas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCF86_07650 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
Rad17
AAA_22
AAA_30
AAA_16
AAA_18
T2SSE
ZSWIM1-3_C
AAA_29
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
USA41006
LinkDB
All DBs
Position
1519588..1520499
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AA seq
303 aa
AA seq
DB search
MADDSPADRQHILLVTGLSGAGKTTALQVLEDLGWEAIDNFPIRLVGRLIGPPNPEATRH
PLAIGFDSRTRGFVPEEIIGKVKDLSRRPDLVVTTLFLDCNSGELERRYNETRRRHPMAA
DRPVRTGIQAERELLEPLRRWADAVIDTSNFSSNDLQQAIRGQFADTAPREMAIIVSSFG
FARGTPPLADLVFDMRFLDNPHWVDGLREQTGLDAAVGDHIERDASFAPVFAQIRDLVLT
LIPRYEAQGKSYVNIAFGCTGGRHRSVYAAQRFAQALREAGFSPTVIHRNLGSRAADEIE
GPQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgattcgcccgctgatcgccagcatatcctcctcgtcaccgggctttcgggt
gcggggaagacgactgccctgcaggtcctggaagacctcggctgggaggcgatcgacaac
ttcccgatccgcctcgtcggccgcctgatcgggccgcccaatcccgaggcgacgcgccac
ccgctggcgatcgggttcgattcgcgcacccgcgggttcgtgcccgaggagatcatcggc
aaggtgaaggacctttcccggcggcccgacctcgtggtcacgacgctgttcctcgactgc
aacagcggcgagctggagcggcgttacaacgagacgcgccgacgccacccgatggcggcc
gaccggcccgtgcgcaccggcatccaggccgaacgcgagctgctggagccgctgcggcgc
tgggccgacgcggtgatcgacacctcgaatttctccagcaacgacctgcagcaggcgatc
cggggccagttcgccgacacggccccgcgtgaaatggcgatcatcgtgtccagtttcggc
ttcgcgcgcggcaccccgccgctggccgacctggtcttcgacatgcgttttctcgacaac
ccgcactgggtggatggcctgcgcgagcagaccgggctggacgcagccgtgggcgaccat
atcgagcgcgacgccagcttcgcgccggtcttcgcgcagatccgggacctcgtgctgacg
ctgatcccgcgatacgaggcgcaggggaagagctacgtcaacatcgccttcggctgcacc
ggcgggcggcacaggtcggtctatgccgcgcagcgtttcgcgcaggccttgcgcgaggcg
ggtttttcccccacggtcatccatcgcaatcttggatcgcgcgcggccgacgagatcgaa
ggcccgcaatga
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