Pelagerythrobacter marinus: NCF86_08540
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Entry
NCF86_08540 CDS
T08297
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas00020
Citrate cycle (TCA cycle)
pmas00190
Oxidative phosphorylation
pmas00650
Butanoate metabolism
pmas00720
Other carbon fixation pathways
pmas01100
Metabolic pathways
pmas01110
Biosynthesis of secondary metabolites
pmas01120
Microbial metabolism in diverse environments
pmas01200
Carbon metabolism
Module
pmas_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmas_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmas_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCF86_08540 (sdhA)
00650 Butanoate metabolism
NCF86_08540 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NCF86_08540 (sdhA)
00720 Other carbon fixation pathways
NCF86_08540 (sdhA)
Enzymes [BR:
pmas01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NCF86_08540 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
USA38384
LinkDB
All DBs
Position
complement(1694079..1695953)
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AA seq
624 aa
AA seq
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MANPAPQTASNGKTGPAYAIVDHTYDVVVVGAGGSGLRATMGAAEAGLKTACITKVFPTR
SHTVAAQGGIAASLGNNTPDHWSWHMYDTVKGSDWLGDQDAIEYMVREAPQAVYELEHAG
VPFSRNENGTIYQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFI
EYFALDLIMENDSSGVPQCCGVIAMCLDDGTIHRFRAKAVVLATGGYGRCYYTATSAHTC
TGDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAP
SAKDLASRDVVSRSMALEMREGRGVGPEKDHIFLHLDHIDPKVLAERLPGITESGKIFAG
VDLTRQPLPVTPTVHYNMGGIPCNYHGEVVTIGPDGDPETVVPGLFAVGEAACVSVHGAN
RLGSNSLIDLVVFGRATGHRLKELIKPGTSHDELPADSADLALTRLDHFRHAGGGSPTAQ
IRSEMQKNMQKHAAVFRDSKLLSEGVELLKQVNRRMEDIHVSDRSLIWNSDLVETLELDN
LMAQANVTIASAENRKESRGAHAHEDFPDRNDAEWMKHTVAWFDGWGGGARGSGSGEVRI
DYRPVHEYTLTDDVAYIKPKKRVY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcccgccccccagaccgccagcaacggcaagaccggcccggcctacgcgatc
gtcgaccatacttacgacgtggtcgtcgtgggcgcgggtggatcgggcctgcgcgccacg
atgggcgcggccgaagcgggcctgaagacggcctgcatcaccaaggtcttccccacccgc
agccacaccgtcgccgcgcaaggcgggatcgccgccagcctgggcaacaacacgcccgat
cactggtcgtggcacatgtacgataccgtcaaggggtccgactggctcggcgaccaggac
gcgatcgaatacatggtgcgcgaggcgccgcaggcggtttacgaactcgaacatgccggc
gttcccttcagccggaacgagaacggcacgatctaccagcgcccgttcggcggccacatg
cagaacatgggcgaaggcccgccggtccagcgcacctgcgcggccgccgaccgcaccggc
cacgcgatgctccacgcgctctaccagcagagcctgaagtacgacgcggacttcttcatc
gagtatttcgcgctcgacctgatcatggaaaacgattccagcggcgtgccgcagtgctgc
ggcgtgatcgcgatgtgcctcgacgacgggacgatccaccgcttccgcgccaaggcggtc
gtgctggcgaccggcggctatggccggtgctattacaccgcgaccagcgcgcatacctgc
accggcgacggcggcggcatggtcctgcgcgcgggtctgccgctgcaggacatggaattc
gtccagttccaccccaccggcatctacggcgcgggcgtgctcatcaccgagggcgcgcgg
ggcgagggcggctacctgacgaactcggaaggcgagcgtttcatggaacgttacgccccg
agtgcgaaggaccttgccagccgcgacgtcgtgtcgcgctcgatggcgctggaaatgcgc
gaagggcgcggcgtcgggccggagaaggaccatatcttcctccacctcgaccacatcgat
cccaaggtcctggcggagcggctgcccggcattaccgaaagcggcaagatcttcgccggg
gtcgacctgacgcgccagccgctgccggtgacgccgaccgtgcattacaacatgggcggc
attccctgtaactatcacggcgaagtcgtgaccatcgggccggacggcgatccggaaacc
gtggtcccgggcctgttcgcggtgggcgaggcggcctgcgtctcggtccacggcgcaaac
cgcctcggctcgaactcgctgatcgacctcgtggtcttcggccgcgcgaccgggcacagg
ctgaaagaactgatcaagccgggcaccagccacgacgagctgccggccgacagcgcggac
ctcgcgctcacccggctcgaccatttccgccacgccggcggcggctcgccgaccgcgcag
atccggtcggaaatgcagaagaacatgcagaagcacgcggccgtcttccgcgacagcaag
ctgctgtccgaaggggtcgagctgctgaagcaggtgaaccggcggatggaggatatccac
gtttccgaccgttcgctgatctggaacagcgacctcgtcgaaacgctcgagctcgacaac
ctgatggcccaggccaatgtcaccatcgcctcggccgaaaatcgcaaggaaagccgcggc
gcccacgcgcacgaggatttccccgatcgcaacgacgccgagtggatgaagcacacggtc
gcctggttcgacggctggggcggcggggcccgcgggtcgggcagcggcgaggtcaggatc
gactatcgcccggtgcacgaatacacgctgaccgacgatgtcgcgtacatcaagccgaag
aagcgggtctactag
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