Pelagerythrobacter marinus: NCF86_09620
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Entry
NCF86_09620 CDS
T08297
Name
(GenBank) heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NCF86_09620
Enzymes [BR:
pmas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
NCF86_09620
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Motif
Pfam:
Hepar_II_III_C
Alg17C_C
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
USA38585
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Position
complement(1930811..1933015)
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AA seq
734 aa
AA seq
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MTRRAALLAAVPASALALALPAAPAHAQAPVAPEQAASAPATPAADLPPLYADEFARARA
FVAGMMEAGVVVPQPRDPGGGYTHEQHKRNYRAILLSGQLYRITGDQAYADYVRAMLLAY
ADLYPTLGDHPARSNQNAGRLFWQVLNDAVWLVHAVQGYAEIRDGLSAADRERIDSQVFR
RAAHFLSVESQATFDRIHNHATWATAGVGMTGYLLGDRDLVERALLGSDKSGQAGFLRQT
ELLFSPDGYYAEGPYYQRYALMPFMVFADAIARNDPQRRIFEHRDGILLKALRTTIQLTY
GGYFFPFNDALKDKSLRTEELYHGIAIAYAQTRDPSLLSIARMQDRTVLTRAGRMVAADL
AAGRAEPFPFRSMLLRDGPEGEQGAVAILREGEGPRHTALVAKNSSQGMGHGHFDKLSWQ
LYDNGHEIVRDYGAARFLNIEAKEGGRYLPENETWAKQTLAHNALVVDGRSHFDGKVRPA
SAVAPEQLHFSVEPGLQVSSARVDGAYPGVGIVRTLVMADVPGLESPVVFDLVTAESEGT
HSYDLPLHYQGAVIELGFPVESHVAARPVLGEGHGYQHVWVDAEATPAAADGALTWLLDG
RFYTYRFATDGATRAVLGQVGANDPDFNLRREPLVLLRRESAGGTTFATLLESHGRYDGA
AEQTVASRSRVAAMRHERQGGKDIVVLTLKDGGQVALAVSHDTDPGARHSATVDGREIAW
SGFAAIVEIGRGGN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagacgcgccgccctgctggcggcggtgccggcgagcgcgctggcgctggccctt
cccgccgcgccggcccacgcccaggcgcccgtcgcgccggagcaggcggcatcggcgccg
gcgacgcccgcggcggacctgccgccgctctatgccgacgagttcgcgcgggcgcgcgct
ttcgtcgccgggatgatggaagccggcgtggttgtgccgcagccgcgcgacccgggcggc
ggctacacgcacgagcagcacaagcgcaattaccgcgcgatcctgctgtcggggcagctt
taccggatcaccggggaccaggcctatgccgactacgtgcgcgcgatgctgctcgcctat
gccgatctctatcccacgctcggcgatcacccggcgcgcagcaaccagaacgcgggccgc
ctgttctggcaggtgctcaacgacgcggtctggctggtccacgcggtgcagggctatgcc
gagatccgcgacgggctgagcgccgccgaccgcgagcggatcgacagccaggtcttccgc
cgcgccgcgcatttcctctcggtcgaatcgcaggccacgttcgaccgtatccacaaccac
gcgacctgggcgaccgccggcgtcgggatgaccggttacctgctgggggaccgcgacctc
gtcgagcgcgcgctgctgggttcggacaagagcggccaggccgggttcctgcgccagacc
gagctgctcttctcccccgacggctattacgccgaaggcccctattaccagcgctatgcc
ctgatgccgttcatggtcttcgccgacgcgatcgcgcgcaacgatccgcagcggcgcatc
ttcgaacatcgcgacggcattctcctcaaggccctgcggacgacgatccagctgacatac
ggcggctatttcttccccttcaacgatgcgctgaaggacaagagcctgcggaccgaggaa
ctctaccacggcatcgccatcgcctatgcccagacccgcgacccgagccttctctcgatc
gcgcggatgcaggatcgcacggtcctgacccgggcggggcggatggtcgcggccgatctg
gccgccgggcgggcggagccgtttccgttccgctccatgctgctgcgcgacgggccggag
ggcgagcagggggcggtcgcgatcctgcgcgaaggcgaggggccgcggcacaccgcgctg
gtggccaagaattcgtcgcagggcatgggccacggccatttcgacaagctcagctggcag
ctttacgacaacgggcacgagatcgtgcgcgattacggcgcggcgcggttcctcaatatc
gaggccaaggagggcggacgctacctgcccgagaacgagacctgggccaagcagaccctg
gcgcacaacgcgctggtcgtggacgggcgcagccacttcgacggcaaggtcaggccggcc
agcgcggtcgcgcccgaacagctccatttctcggtcgaacccggcctgcaggtttccagc
gcccgcgtcgatggcgcctatccgggggtgggcatcgtccgcacgctggtgatggccgat
gtgccggggctggaaagcccggtggtgttcgatctcgtcaccgcggagagcgagggcacg
cattcctacgacctgccgctgcattaccagggcgcggtgatcgaactgggcttcccggtc
gaaagccacgtcgccgcgcgcccggtgctgggcgaaggccacggctaccagcatgtctgg
gtcgatgcggaggccacgccggcggcggccgacggcgcgctgacctggctgctcgacggg
cgtttctacacctatcgcttcgccaccgacggcgcgacccgcgcggtcctgggccaggtc
ggggccaacgatcccgatttcaacttgcgccgcgagccgctggtcctgctgcgccgcgag
agcgcgggcgggacgactttcgccaccctgctggaaagccacggccgctacgacggggcg
gcggaacagaccgtcgccagccgcagccgcgtggccgccatgcgtcacgagcggcagggc
gggaaggacatcgtcgtgctgacgctgaaggacggcgggcaggtcgcgctggccgtttcg
cacgacaccgatccgggcgcgcgccacagcgcgacggtcgacgggcgcgagatcgcctgg
tcgggatttgccgcgatcgtcgagatcgggcggggaggaaactga
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