Pelagerythrobacter marinus: NCF86_11785
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Entry
NCF86_11785 CDS
T08297
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmas03036
]
NCF86_11785
Chromosome and associated proteins [BR:
pmas03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
NCF86_11785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
USA38979
LinkDB
All DBs
Position
complement(2393616..2397869)
Genome browser
AA seq
1417 aa
AA seq
DB search
MFQSDLFPAGEQLPSMPLAYAIGTRVAALLASGRHLTRTDISGLFAEETGVLDWGSAWTI
DDYNSAVEIGALLWLRESSRIDLATNVHEAEARFDWLEAALPPRHVRSEAQVELQQFSTP
PMLACLMAKAAAVCAEDTLLEPSAGNGALALWGCLQNASLLLNEIDPARRDGLAHVFPTA
TITAHDGELIADLLRGPVPSAVLMNPPFAHSLERGKDGETAMRHLRGAIRAAANRARIVA
IMPEGFDASTFAKEQDEASLLLDVRLQQMFRRTGTGIAVRLVVFDKTPTASSPAITGDTA
DLISLHELITALPPRVQTSANIHRLPLGKPVRLVGKTSAQSGPVRPVAPFAATPAATANA
IDLAYSVLADPAPVPEQAGIYLPYRPSRIAFEDAPVHPTPLVESVAMGSVAAPQPDVCPR
IPAFWQADGLLSEAQCETLVYAAQAFARDLPGQFKVSQEGTSLELSEDGHSYRQGFFLGD
GTGAGKGRQIAAVIMDRWLAIERRHVWITKNEALLEDARRDWEALGGLPLDLQPLSRWKL
GQPVTMSEGILFVTYPTLRSGRAEDTRLDQILAWAGEDFDGVIAFDEAHAMANALGGSSA
RGKVKGSEQGMAGLRLQNHLPRARVLYASATGASDIANLGYTSRLGLWGPETAFPTHEAF
MTEIRAGGVAAMELVARDLKAQGLYLARALSFAGVEYEILEHSLTEAQVRIYDAYADAWA
IIHRNLEAALEATRVVDEDSGDTLNRNAKAAALSIFEGTKQRFFAQLLLSMKLPSLIPAM
EAAIGEDHSIVVQLVSTAEAMLDRRLADLTDEEREALDIDLSPREYVIDYLAKSFPVRLM
QVFADEDGNLRSEAMSDDEGNPVFCPRAMAARDALIEQLCALPPIATALDAIIEHFGTEA
VAEVTGRTRRLVSGRDGQQRLERRSPSANVAEAQSFMEGTKRILVFSDAGGTGRSYHADL
GCRNQQRRVHFLLEPGWRADNAIQGLGRTNRTNQASAPLFRPVTTDVKGERRFISTIARR
LDALGALTRGQRQTGGQNLFDPADNLESDYAREALSRWFQLLYDGKLEATSFGNFVERTG
LRLESPDGGLTDNLPTIQRWLNRILALPIALQNAIFDEYLGLVEARIEAAREAGTLDQGL
ETVRVDRFTVLADELLRTDPVIGAETRLVSLEVTRHLRPLRLQRLVRMHEIGSSHAIPMR
NARSGKVALSVPTRRLITDDGAVIERRRLLRPLNSANWTIEALAESHWEEIGVTAFTRAW
RAEEERAAKSPVTERVHLATGLLLPVWKRLPGDHVRVTRLVAEDGQSIIGREVLDIDLAA
IAETFGLSGVTGPAPDQIGDLVLASGKPLGLASHDPLTVKRSLVGGEQRLELTGFSPDRL
DWYKNKGCFTEIIRYRTRLFVPTPRASETLQSIAIKS
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatcagacctgtttcccgccggcgagcagttgccgtccatgcccttggcctat
gccattggcacccgagttgccgcgcttcttgcttcgggacgtcatcttacccgtaccgac
atttccgggctgttcgccgaagagaccggtgttctggattggggaagcgcctggaccatc
gacgactacaacagcgcggtcgagatcggcgcactactctggcttcgagagtcctcacgg
atcgatctggcgacgaatgtacacgaagccgaagcgcggttcgactggctcgaagcagcc
ttgccgccacggcacgttcgcagcgaagcacaggtcgagctccagcagttctcgaccccg
ccaatgctggcctgtctgatggcgaaggccgcagctgtctgcgcggaagacacgctcctc
gaaccgtccgcaggcaatggtgcccttgctctctggggttgcctccagaacgcttcgctg
ctcctcaacgagatcgatccggcaagacgagacggtctggcccacgtcttccccacggcc
accatcactgcgcatgacggggaactgatcgccgacttgcttcgcggccctgttccgtct
gccgtgctgatgaacccgccgttcgctcacagcctggaacgcggcaaggacggtgagacc
gctatgcgtcacctacgcggtgcgatccgggccgctgctaatcgggcgaggatcgtcgcc
attatgcctgaaggcttcgacgcctccaccttcgccaaggaacaggacgaagcatcgctg
ctcctcgatgttcgcctgcagcagatgtttcgccggacagggacggggatcgctgttcgc
ctggttgtgttcgacaagacgccgactgcgtcctcgcctgcgatcaccggagatactgcc
gacctcatctcgctccacgagcttatcactgcgcttccgccacgcgtacagacctccgcc
aacatccatcgcctgcctctcggcaagccagtgcgcctcgttggcaagacttcggcccaa
agcgggccggtgcggccggtggcgccgttcgccgcgacaccagcagcgacggcgaatgcg
atcgaccttgcctattcggtcctcgccgaccccgcgcctgtgcccgaacaggcaggcatc
tacctgccttaccggcccagccgcatcgccttcgaagatgctccggtccatcccaccccg
ctcgtggaatcggtcgccatgggttcggtcgcggcaccgcagcccgatgtttgcccgcgc
attcccgcattttggcaggccgatggcctgctgtccgaagcgcaatgcgagacactggtc
tacgctgcccaggcatttgcgcgcgatcttccgggtcagttcaaggtgagccaggaaggc
acctcgctggaactctccgaggacggacactcctaccgccaaggcttcttcctcggcgac
ggaaccggagcgggcaaaggacggcagatcgccgcggtcatcatggatcgctggctcgca
atcgagcgccgacatgtctggatcaccaagaacgaggcgctgctcgaagatgcacgccgc
gactgggaagcgcttggcgggctgccgctcgatctccagccgctctcgcgctggaaactc
ggccagcccgtaacgatgtccgaaggcattctcttcgtcacctatccgacgctgcgctcg
ggccgcgccgaggatacgcggctcgaccagatccttgcctgggcgggcgaggatttcgac
ggcgtgatcgctttcgacgaagcccacgccatggccaatgctctcggcggctcgtcggcc
cgcggcaaggtcaagggctccgaacaggggatggcgggcctcaggctgcagaaccatctc
ccgcgcgcccgcgtgctctacgcgtctgccacaggtgcctcggatatcgccaatctcggt
tacacctcccggctcggcctttggggacccgagaccgcctttccgacccacgaagcgttc
atgaccgaaattcgcgccggcggcgtcgcggcgatggagcttgtcgcccgcgacctcaag
gcccagggcctctatctcgcccgtgcgttgtccttcgccggggtcgagtacgagatcctt
gagcacagcctgaccgaagcacaggtgcggatctacgatgcctatgccgatgcttgggca
atcattcaccgcaacctcgaagctgcgctcgaagcaacccgcgtggtcgacgaggacagc
ggcgatacgctcaatcggaacgccaaggctgcggcgctgtcgatcttcgaaggcaccaag
cagcgcttctttgcccagctgctgctctcgatgaaattgccgagcctgatccccgcgatg
gaagcggcgattggcgaagaccattcgattgtcgtgcagctggtctcgaccgccgaggcc
atgctcgaccggcgtctcgcagacctcaccgacgaggagcgagaagcgctcgatatcgat
ctgtccccccgtgaatatgtcatcgactatcttgcgaagagcttcccggtgcgcctgatg
caggtcttcgccgacgaagatggcaatcttcgctccgaggcgatgagcgatgatgagggc
aatcccgttttctgcccgcgcgccatggccgcgcgcgatgcgctgatcgagcagctctgt
gcgctgccgcccatcgccactgcgctagacgcgatcatcgagcatttcgggaccgaggcc
gtcgccgaggttacgggccggacccgcaggctggtatcgggccgcgatggtcaacaacgt
ctcgaacggcgtagtcccagtgccaatgtcgccgaagcgcagagcttcatggaagggacc
aaacgtatcctggtcttctcggatgcgggcggcacggggcgatcctaccatgccgacctt
ggctgccggaaccagcagcgccgggtccattttctgctcgagccgggctggcgcgccgac
aacgccatccagggtctcggccgtaccaaccgcaccaaccaggcctcggccccgctgttc
cggccggtaaccaccgacgtgaagggcgagcgccggttcatctcgaccattgcgcgaagg
ctcgacgcattgggcgcgctgacgcgcggccagcgccagaccggcggacagaacctgttc
gacccggccgacaatctcgaaagcgactacgcgcgcgaagcgctcagccgctggttccag
ctgctctatgacggcaagctcgaggccacgagcttcggcaatttcgtcgagcggaccggc
ctccgacttgaaagccccgatggcggattgaccgataatctccccacgatccaacgctgg
ctcaaccgcattctcgcgctgccgatcgcgctccagaacgccatattcgacgaatacctt
ggtctcgtcgaagcgcggatcgaagctgcgcgtgaagccggaacgcttgatcagggactg
gaaaccgtgagggtcgatcgcttcacggtgctcgccgatgaactcctgcgcacagaccct
gtgatcggtgccgagacccgtctcgtctcgctcgaagtgacgaggcaccttcggcctctg
cgattgcagcgcctggtgcggatgcacgagattggcagttcgcacgcgatcccgatgcgc
aatgcgcgctcgggcaaggtcgcgctgtcggttccgacccgccgtctcatcaccgacgac
ggggccgtgatcgaacgccgacgccttctgcgcccgctcaactccgcgaactggacaatc
gaggcactcgctgaaagccactgggaagaaattggcgtcaccgcattcacgagggcctgg
cgtgccgaggaagagcgagcggccaagtcaccggtgaccgagcgcgtgcatctcgccacc
gggctgctgctcccggtgtggaaacgtctgccgggcgatcatgtccgcgtcacccggctc
gttgccgaggacggtcagtcgatcatcggccgcgaagtgctcgatatcgatctcgctgcg
atcgctgagacctttggcctctccggagttaccggtccggcgccggaccagatcggcgat
ctcgtcctcgccagcggcaaaccgttgggcctcgcaagccacgatccactcacagtgaag
cgttcgctggttggcggcgaacagcgccttgaactgaccggattctcgccggatcgcctc
gactggtacaagaacaagggctgcttcaccgagatcattcgctaccgcacgcggctgttt
gtcccgacgccgagagcaagcgagaccctccaaagcatcgcaatcaagtcttga
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