Pelagerythrobacter marinus: NCF86_12935
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Entry
NCF86_12935 CDS
T08297
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03030
DNA replication
pmas03430
Mismatch repair
pmas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCF86_12935 (dnaQ)
03430 Mismatch repair
NCF86_12935 (dnaQ)
03440 Homologous recombination
NCF86_12935 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmas03032
]
NCF86_12935 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_12935 (dnaQ)
Enzymes [BR:
pmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCF86_12935 (dnaQ)
DNA replication proteins [BR:
pmas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCF86_12935 (dnaQ)
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCF86_12935 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
USA39185
LinkDB
All DBs
Position
2620782..2621468
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVFDTETTGLDPASGDRMVEIGCVELMNRVPTGQTFHAYFNPERDMPAGAEAVHGLS
SAFLADKPLFRDTAQALLEFIADSPLVAHNAAFDFGFLNAELSLCEREAVCMSRMIDTVA
LARKRHPGAKLSLDALCSRYGVDRSHRVKHGALLDAELLAQVYVELTGGRQIGLELAAET
SRTDVIAVVSRPRAQRTPRPARPHAASAEELSRHRAFLARMEAPLWSS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtgttcgacaccgaaaccaccggcctagaccccgccagcggggaccgg
atggtcgagatcggctgtgtcgagctgatgaaccgcgtacccaccgggcagaccttccac
gcctatttcaacccggaacgcgacatgcccgccggggccgaggcggtccacggcctgtcg
agcgccttcctggcggacaagccgctgttccgcgacacggcgcaggccctgctcgaattc
atcgccgattcgccgctcgtcgcgcacaacgcggcgttcgacttcggctttctcaatgcc
gaactctcgctctgcgagcgcgaggccgtgtgcatgagccggatgatcgacacggttgcg
ctggcgcgcaagcggcacccgggcgcgaagctctcgctcgatgccttgtgcagccgttac
ggcgtcgatcgcagccaccgggtgaagcacggcgccctgctcgatgccgagttgctcgcc
caggtctatgtcgaattgaccggcgggcggcagatcgggctggaattggcggccgagacc
tcgcgcaccgacgtgatcgccgtcgtcagccgcccccgggcgcagcggaccccgcggccg
gcgcggccccacgcggccagcgccgaagagctttcccggcaccgggccttcctcgcgcgc
atggaggcgccgctttggagcagctga
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