Pelagerythrobacter marinus: NCF86_12985
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Entry
NCF86_12985 CDS
T08297
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas00061
Fatty acid biosynthesis
pmas00071
Fatty acid degradation
pmas01100
Metabolic pathways
pmas01212
Fatty acid metabolism
pmas02024
Quorum sensing
pmas04146
Peroxisome
Module
pmas_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCF86_12985
00071 Fatty acid degradation
NCF86_12985
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCF86_12985
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCF86_12985
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmas01004
]
NCF86_12985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmas04147
]
NCF86_12985
Enzymes [BR:
pmas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCF86_12985
Lipid biosynthesis proteins [BR:
pmas01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCF86_12985
Exosome [BR:
pmas04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCF86_12985
Exosomal proteins of breast cancer cells
NCF86_12985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
USA39195
LinkDB
All DBs
Position
complement(2626485..2628314)
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AA seq
609 aa
AA seq
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MRDQEPLALQLSDIDAANNLVELFLRRADAKGDAPFLGAKRDGTWQTMSWREAARTVCVL
AQNLRALGLEDGDRVMLVSENRPEWCIADLAIMAAGCVTVPAYVTNTERDHVHILDNSGA
RAVIVSTEKLSQPLLPAIMRTGIAEHVIPIDGIRQYQSGSLTCHGWSAMTEGDAAAAREA
VDKRMASVGRSDTACIIYTSGTGGAPRGVLQHHGAILCNVAGAAEILANDFGLDEDDRFL
SFLPLSHAYEHTGGQCLPIAVGAQIFYAEGLEKLASNIEETRPTIMVVVPRLFEVLRQRI
MKQVDKQGGAAKALMDRALALGQRKAEGRYRLGDKTLDFVLERLLRPKIRQRFGGRIKAM
VSGGAPLNPEVGVFFQSMGLTMLQGYGQTEAGPVISCNRPRAGIAMHTVGPPLRGVEIAI
ADDGEILCRGELVMHGYWQNKAETERALKDGWLHTGDIGHLDENGRIVITDRKKDMIVND
KGDNVAPQKLEGMLTLRPEIAQAMVSGDKRPYVVGLIVPDAEWALEWARANGEKFDLPAL
QDLPAFRSAIRAVIDEVNRELSVIEKIRQFAFADEPFTIENEEMTPSMKIRRHKIRERYG
PRLDALYRH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcgggatcaggagcccctagccttgcaattgtctgacatcgatgcggcgaacaacctc
gtcgaactgtttctccggcgcgccgacgccaagggggacgcccctttcctgggggcgaag
cgcgacggcacctggcagacgatgtcctggcgcgaggcggcccgaacggtctgcgtcctg
gcccagaacctgcgcgcgctcggcctcgaggacggggaccgggtcatgctggtatcggaa
aaccggcccgagtggtgcatcgccgacctcgcgatcatggcggccggctgcgtgacggtg
cccgcctatgtcaccaataccgagcgcgaccacgtccatatcctcgacaactcgggcgcc
cgcgcggtgatcgtttcgaccgagaagctgtcgcagccgctgctgcccgcgatcatgcgg
accgggattgccgagcacgtgatcccgatcgacggcattcgccagtaccagtcgggcagc
ctgacctgccacggctggtcggccatgaccgaaggcgatgcagccgccgcgcgcgaggcg
gtcgataagcggatggcctcggtcggccggtccgacaccgcctgcatcatctataccagc
ggcaccggcggcgcgccgcgcggcgtgctgcagcaccacggcgcgatcctgtgcaacgtc
gccggcgcggcggaaatcctggcaaacgacttcggcctcgacgaggacgaccgcttcctc
tcgttcctgccgctcagccacgcatacgagcacacgggggggcaatgcctgccgatcgcc
gtgggggcgcagatcttctatgccgaggggctagagaaactggccagcaacatagaggaa
acgcgcccgacgatcatggtcgtcgtcccgcgcctgttcgaggtcctgcgccagcggatc
atgaagcaagtggacaagcagggcggcgcggccaaggccctgatggaccgcgcgctcgcg
ctcggccagcgcaaggcggaaggccgctaccgcctgggcgacaagacgctcgacttcgtg
ctggaacggctgctgcggcccaagatccgccagcgtttcggcgggcgcatcaaggcgatg
gtttcgggcggcgcgccgctcaaccccgaagtcggcgtgttcttccagtcgatggggctg
accatgctgcagggatatggccagaccgaggccgggcctgtcatcagctgcaaccgcccg
cgcgccgggattgccatgcacacggtcggcccgccgctgcgcggggtcgagatcgcgatc
gccgacgacggcgagatcctctgccggggcgagctggtcatgcacggttactggcagaac
aaggcggagaccgagcgcgcgctgaaggacggttggctccacaccggcgatatcggccac
ctggacgagaatggccggatcgtgatcaccgatcgcaagaaggacatgatcgtcaacgac
aagggcgacaatgtcgcgccgcagaagctggaaggcatgctgacgctgcggcccgagatc
gcgcaggcgatggtgagcggcgacaagcgcccctatgtcgtcggcctgatcgtgcccgat
gccgaatgggcgctcgaatgggcgcgcgcgaatggcgagaagttcgacctgccggcgctg
caggacctgcccgccttccgcagcgcgatccgcgcggtgatcgacgaggtgaaccgcgag
ctgtcggtgatcgagaaaatccgccagttcgccttcgcggacgagccgttcacgatcgag
aacgaggaaatgacgccgtcgatgaaaatccgccggcacaagatccgcgaacgctacggg
ccgcgtctcgacgcgctgtaccggcactga
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