Pelagerythrobacter marinus: NCF86_13330
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Entry
NCF86_13330 CDS
T08297
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCF86_13330 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_13330 (ung)
Enzymes [BR:
pmas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCF86_13330 (ung)
DNA repair and recombination proteins [BR:
pmas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCF86_13330 (ung)
Prokaryotic type
NCF86_13330 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
USA39256
LinkDB
All DBs
Position
complement(2700308..2700997)
Genome browser
AA seq
229 aa
AA seq
DB search
MSEAIPESWQAALEPVLSAPEARRLGGWLQAEEAAGRTIYPPRGTRLAALDLTPLDRVRV
VILGQDPYHGPGQAMGLCFAVPQGVRVPPSLLNIYKELESDLGLPRPGHGDLSAWARQGV
LLLNNALTVEAGRAGSHAGKGWEAITDACVAAVAARPEPSAFILWGSHAQAKAARIPDLA
GTQRHLVLRSPHPSPLSAHRGFFGSRPFSRANAFLEAQGRGAIDWQLRS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcaatccccgagagctggcaggcggcgctggagccggtgctttccgcgccc
gaggcacggcggctgggcggctggctgcaggccgaggaagcggccgggcgcacgatctac
ccgccgcgcggcacgcgccttgccgcgctcgacctgaccccgctcgaccgggtgcgcgtg
gtgatcctggggcaggacccctatcacgggccggggcaggcgatgggcctgtgcttcgcc
gtgccccagggggtccgcgttccgccgagcctgctcaacatctacaaggaactggaaagc
gatctcggcctgccgcggcccggccacggcgatctcagcgcctgggcgcggcaaggggtc
ctgctgctcaacaatgccctgacggtggaggccgggcgcgccggcagccacgcgggcaag
gggtgggaagcgatcaccgacgcctgcgtcgcggcggtcgcggcgcggccggaaccgagc
gcgttcatcctctggggcagccacgcccaggccaaggccgcgcggatacccgacctcgcc
ggcacgcagcgccacctcgtcctgcgctcgccgcatcccagcccgctgtcggcccatcgc
ggcttcttcggctcgcgcccgttcagccgggccaatgccttcctcgaggcgcagggccgc
ggcgcaatcgactggcagctcagaagctag
DBGET
integrated database retrieval system
