Pelagerythrobacter marinus: NCF86_13755
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Entry
NCF86_13755 CDS
T08297
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCF86_13755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmas03400
]
NCF86_13755
Enzymes [BR:
pmas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCF86_13755
DNA repair and recombination proteins [BR:
pmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCF86_13755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
USA39332
LinkDB
All DBs
Position
complement(2784160..2784951)
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AA seq
263 aa
AA seq
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MLSIATWNINSVRLRIEQVKRVIEEQSPDVLCLQEIKCQESQFPAAALADMGYVHQAVHG
QKGYHGVATVSRIPMREFCRHDWQDNGEARHVGVELLGPGQNVVLENVYIPAGGDVADRE
VNPKFGQKLDFLGRMTRWAEAIDRPTLIVGDFNIAPLECDVYDHKALLKVVSHTPIEVET
LGRFRDAHGWVDLGREFIPAPERNYSWWSYRSFWRQKDQGRRLDHMWASPDLARQATGHR
FVEETRRWESPSDHVPLVTEFAL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgctttccattgccacctggaatatcaattcggtccgcctgcgtatcgagcaggtcaag
cgcgtgatcgaggaacagtcccccgacgtcctctgcctgcaggaaatcaagtgccaggaa
agccagttcccggccgccgcgctggccgacatgggctacgtccaccaggccgtgcacggg
cagaagggctatcacggggtggccacggtcagccgcatcccgatgcgcgagttttgccgc
cacgactggcaggacaacggcgaggcgcggcacgtcggggtggagctgctcggccccggg
cagaacgtcgtgctggaaaacgtctatatcccggccggcggcgacgtcgccgaccgcgag
gtcaatcccaagttcgggcagaagctcgacttcctcggccggatgacccgctgggccgag
gcgatcgaccggccgacgctgatcgtcggcgatttcaacatcgcgccgctggaatgcgac
gtctacgatcacaaggccctgctcaaggtcgtcagccacacgccgatcgaggtcgagacg
ctcggccggttccgcgacgcccatggctgggtggacctggggcgcgagttcatccccgcg
ccggaacggaattactcgtggtggtcctatcgcagtttctggcgccagaaggaccagggc
cggcggctcgaccacatgtgggccagccccgatctcgcgcgccaggcgaccgggcaccgc
ttcgtcgaggaaacgcggcgctgggaaagcccgagcgaccacgtcccgctggtgacggag
ttcgcgctctga
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