KEGG   Pelagerythrobacter marinus: NCF86_14970
Entry
NCF86_14970       CDS       T08297                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pmas  Pelagerythrobacter marinus
Pathway
pmas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NCF86_14970 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmas03400]
    NCF86_14970 (ruvB)
Enzymes [BR:pmas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCF86_14970 (ruvB)
DNA repair and recombination proteins [BR:pmas03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NCF86_14970 (ruvB)
    RecFOR pathway proteins
     NCF86_14970 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 AAA_3 AAA_2 AAA_22 Rad17 AAA_14 AAA_17 AAA_18 nSTAND3 TsaE RNA_helicase Bac_DnaA DUF815 NB-ARC AAA_33 AAA_24 NTPase_1 AAA_28 Parvo_NS1 ABC_tran NACHT IstB_IS21
Other DBs
NCBI-ProteinID: USA39563
LinkDB
Position
complement(3061893..3062924)
AA seq 343 aa
MTDPVPLHTPDRQPEDPDAALRPKSLDEFVGQEAARGNLKVFIESAKSRGEAMDHVLFFG
PPGLGKTTLAQIVAKELGVGFRATSGPVIAKAGDLAALLTNLEPHDVLFIDEIHRLNPVV
EEVLYPAMEDRALDLIIGEGPSARSVRIDLPPFTLVGATTRQGLLTTPLRDRFGIPVRLN
FYTHEELDRVVTRGARLLGMDIDAAGAREIARRSRGTPRVAGRLLRRVRDFAHVAGGGTV
TRTVADEALTRLEIDRLGLDAMDRRYLAMIATTYRGGPVGVETLAAGLSEPRDTVEEVIE
PYLIQLGLVARTARGRCLNESGWQHLEMAPPKGAQSGLFDGNP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgaccgatcccgtccccctccacacccccgatcgccagccggaagacccggacgcggcc
ctgcggccgaagtcgctggacgagttcgtcgggcaggaggccgcgcgcgggaacctcaag
gtcttcatcgaaagcgcgaagtcgcgcggcgaggcgatggaccacgtgctgttcttcggc
ccgccggggctgggcaagaccacgctggcgcagatcgtggccaaggaactgggcgtgggc
tttcgcgccacgtcgggcccggtgatcgccaaggcgggcgatctggccgcgctgctgacc
aacctcgagccgcacgatgtcctgttcatcgacgagatccaccggctgaacccggtggtc
gaggaagtgctctaccccgcgatggaagatcgcgcgctcgacctgatcatcggcgagggg
ccctccgcccgcagcgtgcggatcgacctgccgcccttcaccctggtcggcgcgaccact
cgccagggcctgctgacgacgccgctgcgcgaccgtttcggcatcccggtgcggctgaac
ttctacacccacgaggaactggaccgggtcgtcacccgcggtgcgcgcctgctgggaatg
gacatcgacgccgccggcgcgcgcgagatcgcccggcgcagccgcggcaccccccgcgtc
gccgggcggctgctgcgccgggtgcgcgacttcgcgcatgtcgccggcgggggcacggtc
acgcgcacggtggccgacgaggccctgacccggctcgagatcgaccgcctcggcctcgac
gcgatggatcgccgctacctggccatgatcgcgacgacctatcgcggcgggccggtgggg
gtcgaaacgctcgccgcgggcctttccgaaccgcgcgacacggtggaggaagtgatcgag
ccctacctgatccagctgggcctggtggcgcgcacggcgcgcggccggtgcctgaacgaa
tcgggctggcaacacctcgaaatggcgccacccaagggcgcgcaatcgggtttgttcgac
ggaaatccctaa

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