Pelagerythrobacter marinus: NCF86_15560
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Entry
NCF86_15560 CDS
T08297
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmas03016
]
NCF86_15560 (truB)
Enzymes [BR:
pmas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCF86_15560 (truB)
Transfer RNA biogenesis [BR:
pmas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCF86_15560 (truB)
Prokaryotic type
NCF86_15560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
USA41257
LinkDB
All DBs
Position
plas1:96906..97850
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQVVEERPLTFSPEQLAAALDGFRGKTQ
QIPSMYSALKYQGKKLYEYARQGIEVPRESRPITVYELLFIRHEGTELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLEQLQALVEQAHAQDIPAAQLLDPL
LMPMDSPASDYPLVNIPETSAVYFKNGNPVRTSGAPLQGLVRVTEGAEEKFLGMGEMDDE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcacggcgtactgttgctggataaaccg
cagggcgcatccagcaacgacgtgctgcagaaagttaagcggctttataatgctaatcgg
gcagggcacaccggggcgctggatccgctggcgaccggtatgctgccgatttgcctcggg
gaagcgacaaagttttcccagtatctgctcgattctgacaagcgctaccgcgtgattgcc
aggcttggccagcgcaccgatacctctgatgccgatggccaggtggtggaagagcgtccg
ctgacttttagcccggagcagttggcggcagcgctcgacggcttccgtggcaaaacccag
cagataccgtcgatgtattcggcgctgaaataccaggggaaaaagctgtacgaatatgcc
cgacaggggattgaagtaccgcgtgaatcccggccgattacggtgtacgagctgctgttt
attcgccatgaggggacggagcttgagctggaaattcactgctcgaaaggcacctacatt
cgcacgattattgatgacttaggcgagaaactcgggtgcggcgcgcacgtcattttcctg
cgtcgcctggcggtcagtaaatatcccgtcgaacggatggtgacgctggagcagctgcag
gcgcttgtcgaacaagcgcatgcgcaggatattcccgcagcccagctgctggacccgctg
ctgatgccgatggacagcccggcttcggattatccgctggtgaatattccggaaacctcg
gccgtctactttaaaaacggtaacccggtgcggacatcgggcgcgccgctgcagggactg
gttcgcgttactgaaggcgctgaagagaagtttcttggtatgggtgagatggatgatgaa
ggccgcgtggcgcctcgtcgtctggtggttgaataccctgtctga
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