Pelagerythrobacter marinus: NCF86_16860
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Entry
NCF86_16860 CDS
T08297
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pmas
Pelagerythrobacter marinus
Pathway
pmas00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCF86_16860 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmas01007
]
NCF86_16860 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmas03016
]
NCF86_16860 (lysS)
Enzymes [BR:
pmas01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NCF86_16860 (lysS)
Amino acid related enzymes [BR:
pmas01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NCF86_16860 (lysS)
Transfer RNA biogenesis [BR:
pmas03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCF86_16860 (lysS)
Prokaryotic type
Other AARSs
NCF86_16860 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
USA41487
LinkDB
All DBs
Position
plas1:362783..364300
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AA seq
505 aa
AA seq
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MSEQQAQGADAAIDLNNELKARREKLAALREQGIPFPNDFRRDHTSDQLHADFDGKENEE
LEALNVEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLAEGVYNEQFKKWDLGD
IIAARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQILAGIRQFMVGRGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGHTEVPYGDQTFDFGKPFEKLTMREAIKKYRPETEMADLDNFDSAKAIAESIGI
HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFLDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacaagcacagggcgctgacgcggcaattgaccttaataatgaactgaaa
gcccgtcgtgagaagctggccgcgctgcgtgagcagggtatcccgttcccgaatgatttc
cgtcgtgaccacacctctgaccaactgcacgctgacttcgatggcaaagaaaacgaagag
ctggaagcgctgaatgttgaagtcgccgtcgcaggccgcatgatgacccgtcgtatcatg
ggtaaagcctccttcgttacgctgcaggacgttggcggccgcattcagctgtacgtcgcc
cgcgacgatctggcggaaggcgtctacaacgagcagttcaaaaagtgggacctcggcgat
atcatcgcggcgcgcggtaagctgttcaaaaccaaaaccggagagctctctattcactgc
accgagctgcgtctgctgaccaaagccctgcgcccgctgccggacaaattccacggcctg
caggatcaggaagcgcgctatcgtcagcgctacctggacctgatctccaacgatgaatcg
cgcaacacctttaaagtgcgttcgcagatcctggcgggcatccgccagttcatggtcggc
cgcggctttatggaagttgaaaccccgatgatgcaggtgatccccggcggcgcgtccgcg
cgtccgttcatcacccatcacaacgcgctggatctggacatgtacctgcgtatcgcgccg
gaactgtacctgaagcgtctggtggttggcggcttcgagcgcgtgttcgaaatcaaccgt
aacttccgtaacgaaggtatctccgttcgccataacccagagttcaccatgatggaactc
tacatggcgtatgcggattacaaagatctgattgagctgaccgaatccctgttccgcacc
ctggcgcaggacgttctgggccatactgaagtgccttacggcgatcagacttttgatttc
ggcaagccgtttgaaaagctgaccatgcgcgaagcgatcaagaagtatcgtccggaaacc
gagatggccgatctggataacttcgattctgcaaaagccattgcggaaagcatcggtatc
cacgttgagaagagctggggtctgggccgcatcgtgaccgagatcttcgaagaagtggcg
gaagcgcacctgattcagccgaccttcattaccgaatatccggcagaagtctctccgctg
gcgcgtcgtaacgacgagaacccggaaatcaccgaccgctttgaattcttcatcggcggg
cgtgaaatcggtaacggctttagcgagttgaacgatgcggaagaccaggcgcagcgtttc
ctcgatcaggttaacgcgaaagccgccggtgacgacgaagcgatgttctatgatgaagac
tacgttactgcgctggagcacggcctgccgccgaccgctggcctcggtatcggtatcgac
cgtatggtgatgctgtttaccaacagccacaccatccgcgacgtgatcctgttcccggcg
atgcgtccggtaaaataa
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