Pelagerythrobacter marinus: NCF86_17025
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Entry
NCF86_17025 CDS
T08297
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
pmas
Pelagerythrobacter marinus
Brite
KEGG Orthology (KO) [BR:
pmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmas03000
]
NCF86_17025
Transcription factors [BR:
pmas03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NCF86_17025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_Crp_2
TrmB
MarR
HTH_5
HxlR
HTH_29
MarR_2
HTH_24
Rrf2
HTH_PafC
HTH_36
FaeA
HTH_IclR
HTH_20
HTH_Mga
LexA_DNA_bind
Put_DNA-bind_N
HTH_23
SoFic-like_C
HTH_7
HTH_28
HTH_9
DUF2250
Crp
Motif
Other DBs
NCBI-ProteinID:
USA41517
LinkDB
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Position
plas1:complement(398112..398912)
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AA seq
266 aa
AA seq
DB search
MLPLERHRLIVELLGQRGVMRVNEIAQATRVSRETIRRDLSELERKGILNRSHGGALAAE
NPLPAIRAVSPALPVEDSQGSFQQRTLLHSEGKMRVARKALQCLQPGQTIVLDGSSTSWF
LARQMPEMALTVITPSIRILQTLMSRRSLHLVGLGGDFSPTEESFFGETASRTLREYAVD
TLFFSCQGLERDSGLYAGTEAHAALLKQMMLAARQTVALVDGSKLGRTGVARIGGLGELD
CLITEKFVDPLLEKEMTWHNVGLQIA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctggaacgtcatcgtttgattgttgaactgctgggccaacgcggcgtgatg
cgggtgaatgagattgcgcaagcgactcgggtctccagggaaacgattcgccgcgatctg
agcgagctggaacggaaagggattttaaatcggagccatggcggagcgctggctgcggag
aacccgctgccggcaatccgggcggtgtcgcccgccctgccggtcgaagatagccaggga
agctttcagcagagaacgctgctgcacagcgaaggaaaaatgcgcgttgcccgcaaagcg
ctgcagtgtctccagccgggacagaccatcgtcctggacggcagcagcaccagctggttt
ttggcccggcagatgccggagatggcgctaacggtgattacgccctccatccgcatcttg
caaacgctgatgagcagacgctcgttgcatctcgtgggactggggggcgatttttccccg
accgaggagtcgttcttcggtgaaaccgcctcacgaacgctgcgggagtacgccgtcgat
acgctctttttctcctgccaggggctggagcgcgatagcggtttatatgcgggtacggaa
gcccacgccgccctgttgaaacagatgatgctggccgcccgtcagaccgtggcattggtt
gacggcagcaagctggggcgaacaggcgtcgcgcggatcggcggattgggcgagctggac
tgtttaatcaccgaaaagtttgtcgatccgctgctggaaaaagagatgacctggcataac
gtcgggctacagatcgcctga
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