Planococcus maritimus: BBI11_03660
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Entry
BBI11_03660 CDS
T06704
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pmat
Planococcus maritimus
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmat03021
]
BBI11_03660
Transcription machinery [BR:
pmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBI11_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_37
GerE
HTH_23
HNF-1_N
HTH_3
DUF1492
DUF134
Packaging_FI
Sigma70_ECF
KORA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU16214
LinkDB
All DBs
Position
531159..531941
Genome browser
AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLEWIEAYQKTEDEEAQTNLVLNYRRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSYGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVEEDDILEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKADQRMLVAEAMNVLSDREKQIIQYTYIEQLSQKEAGDRLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaatctcatcctaatcagccaacgaaagaacaggtactggaatggattgaa
gcttaccaaaaaaccgaggacgaggaagcgcaaacgaacctggtcctcaattatcgccgc
ttggtagaatcgattgcccgcaagtattctaacgggaaatcctatcatgaagacatcgca
caagtcgggatgctcggcttgctcggtgcgattcggcgttatgacccatcttatggccgc
agcttcgaagctttcgcagtgccgaccattattggcgaaatcaagcgctttttgcgtgat
aaaacatgggctatccatgtgccgcgccgcattaaagagttggggccgcgcattaaagcg
actgtggaagtgctgacaacagagctccagcgatcgccgcaagtatgggaaattgctgaa
tacctggatgttgaagaagacgacattttagaagcgatggagatgggcaaaagctatcaa
gcactttccatggaccattcactcgaggcggattcggacggcagtacagttactttgttt
gacgtagtcggccaagaagatgacggatatgaaaaagcggatcagcgcatgctcgtggcg
gaagcgatgaatgtcctttctgatcgggaaaagcagatcatccaatacacttacatagag
cagctgagccaaaaagaagcaggcgacagattgggaatttcccaaatgcacgtgtcgcgt
cttcagcggaaagccattaaaaagcttcaggaagccattttggctgctggcggggtttcc
tag
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integrated database retrieval system
