Planococcus maritimus: BBI11_07395
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Entry
BBI11_07395 CDS
T06704
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmat
Planococcus maritimus
Pathway
pmat03030
DNA replication
pmat03430
Mismatch repair
pmat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI11_07395
03430 Mismatch repair
BBI11_07395
03440 Homologous recombination
BBI11_07395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmat03032
]
BBI11_07395
03400 DNA repair and recombination proteins [BR:
pmat03400
]
BBI11_07395
Enzymes [BR:
pmat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI11_07395
DNA replication proteins [BR:
pmat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBI11_07395
DNA repair and recombination proteins [BR:
pmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBI11_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Complex1_49kDa
DUF655
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ANU16850
LinkDB
All DBs
Position
1292812..1295865
Genome browser
AA seq
1017 aa
AA seq
DB search
MVYPHIVTAADPLQSTIRLEELFGVLIEQGAGAAALVNSKLYGVLPFWDACKKAGIHGVL
GLSVPVDFDGAALPVVLYAQNNTGYHMLLKLSSALATRDVEAIPQKWLVAYQEGLFCVIP
DHAMWVLTDRSEAFGILSRLFGERLIASIERPGGMIKETESAFIDSCSSFGLQFMASHEC
RYIKEQDAFAYEVASAIGDGFKLSDPERGKPEHSSAFVPTKSQWAEWFSDHPEWLEQSRT
LLMSCRVTISLNRQLLPKYPVKEGSDKHDVIRSLCLNGLQERVGELQQTYSDRLDYELGV
ISSMGYIDYFLIVSDFMAFARKKGILTGPGRGSSAGSLVAFALRITDVDPLAHGLLFERF
LNPERVTLPDIDIDFADHRRHEVVEYVAKKYGALQTAQIITFGTLSAKAVARDTARVFGF
EAEELEKISKLIPSRPGITLREALRESKALEEWIIGNETRERWFKTALRLEGLPRNSSIH
AAGVILSPGPLVDYVPIEKGNDDIFITQWPMQELEAIGLLKMDFLGLRNLTILENMAHML
KRDRNMTIDYRNLPFDDQASFSLLAKGDTAGIFQLESPGMRRALMLIKPNAFGDIVAVNA
LYRPGPMEFIPLYARRKHAEEAVTYIHPVLEPILSETYGVIVYQEQIMKIAADMAGFSLG
EADLLRRAVSKKSRQILDEEREHFVGGATEKGYTAKEAGDVYDLIVRFADYGFPKSHAVA
YSMISYQLAYMKAHYPVQFYAALLSNSQGNNEKTAQFMREMKDRGIALAAPCIRNSRYGF
SSEGQQVRAGLSTVKGVPGTAVKAILAARKNGPFESLFNIAERISAVHFTRKALEPLIKA
GALDELGKDRAVLLASLDSAIKHAELVKPNEEPGLFDEMGSSFMKPKYTKAEPMPDGLKL
DFEKEALGFYLSTHPVEREKEQRNKTYTALNDMPKKKDRERVEVLGLVEDVRRIRTKKGD
AMAFVTLQDETGVASVTLFPKEYAQYNEMLDKDALLEIQGTAETRQGKTTIICKNIV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtctatccgcatatcgtgacggcggctgatccgctccaaagcacgattcgccttgaa
gaattattcggagttctcatagaacaaggcgctggagcggcagctctggtcaattctaaa
ttatatggcgttcttcctttttgggacgcatgcaaaaaggccggcatccacggggtgctc
ggcctttccgtgcctgttgattttgatggtgccgcgctgcctgttgtgctttatgcacag
aacaacaccggttaccatatgttattaaaactaagcagtgctttagccacacgagatgtg
gaagcaatcccgcaaaaatggctagttgcatatcaggaaggtttattctgtgtgattccc
gatcatgccatgtgggtgttgacagatcgtagtgaagcgttcggcattctgtcgcgttta
tttggggagcgcttgattgctagtatcgagcggcctggtggcatgatcaaagaaaccgaa
agcgcatttatcgacagctgttcatcatttgggctccaattcatggcgagccatgaatgc
cgttatataaaagagcaagatgctttcgcttatgaagtagcaagtgcaatcggcgacggc
tttaagcttagcgatcccgaacgggggaaacctgagcattcatcggcttttgtgccaacg
aaaagccaatgggcggaatggttttcagaccatccagaatggttggagcaaagccgtacg
ttgcttatgagctgccgtgtcaccatctccttgaatcgacaattgctgccaaaatatccg
gtaaaagaaggtagcgataaacacgatgtcatccgttcactttgtttgaatggcttacaa
gaacgtgtcggggaattgcaacaaacttattcggatagactcgattacgaactgggcgtc
atttcgtccatgggctatatcgattactttctcatcgtgtccgactttatggcctttgcc
agaaaaaaaggcatcttgaccgggccgggccgtggatcttctgccggttcactcgtggcc
tttgcactgcgcattacggacgtagacccgcttgcacacggcttgttattcgaacggttc
ctgaatccagagcgtgtcactttgccggatatcgatattgatttcgcagatcaccgccgc
catgaagtcgtcgaatatgttgcgaaaaaatatggcgccttgcaaacggcacaaatcatt
actttcggaacattgtcagcaaaagcggttgcgagagatacagcaagggtatttgggttt
gaggctgaagaacttgagaaaatttcaaaacttatcccgagtcgaccaggcatcactttg
cgcgaagcacttcgcgaatcgaaagctctagaagaatggattatcggcaatgaaacccgt
gaacgttggttcaaaactgcgctccggctggaaggccttccccgcaattcttctattcat
gccgcaggcgtcattttgagcccgggcccgttagtggattacgtaccaattgaaaaaggc
aatgacgatatattcatcacccaatggcctatgcaggaacttgaagcgatcggcttattg
aaaatggattttcttgggctgcgcaatttaaccattttggaaaacatggcgcatatgcta
aaacgcgaccgaaacatgacaatagattaccgaaacttgccgttcgacgatcaagcaagc
tttagcctactggcaaaaggcgatacagcgggcatttttcagttagaatcaccgggcatg
cggcgagctttgatgctcattaaaccgaatgcatttggtgatattgtcgcggttaatgcc
ttgtaccgcccaggcccgatggaatttatcccgctttatgcgcggcgcaagcacgcagaa
gaggcggtcacctatattcatcccgtactagagccgattttatcggaaacatatggcgtc
atcgtctatcaggagcaaatcatgaaaattgctgctgacatggcgggctttagtctaggc
gaagccgatctattgcgccgagctgtcagcaaaaaaagtcgccaaatacttgatgaagag
cgtgagcattttgttggcggtgctacggagaaaggctataccgctaaagaagcaggggat
gtttatgacttgattgtgcggtttgccgattatggctttccgaaaagccatgcagtcgcc
tatagcatgatttcttatcaactggcgtatatgaaagcccattaccctgtgcagttttat
gctgccctattatcgaacagccaaggcaataatgagaaaacggctcaattcatgcgggaa
atgaaagatcgtggaattgcccttgccgcgccttgtatacgaaacagccgctatggattt
tcatcggagggccaacaagttcgtgcaggattgagcactgtaaaaggcgttcctggcaca
gcagtgaaagccattctggcagctagaaaaaatggcccctttgaaagcctctttaatatt
gctgaacgcatatcagccgtgcatttcactcgcaaagcgcttgagccattgatcaaagcg
ggcgcattggatgagcttggcaaagatcgtgctgtgctgctcgcatctctagacagcgca
atcaagcatgcagaactggttaagcccaatgaagaacctggtttgttcgatgaaatggga
tctagctttatgaaaccgaaatacacaaaagctgaaccaatgcccgacggactcaagctc
gactttgaaaaagaagcacttggattttatttgagtacccatcctgtggaacgtgaaaaa
gaacagcgaaataaaacgtatacagcgctcaacgacatgccgaagaaaaaggaccgcgag
cgtgtagaagtgctgggactggtagaagatgtgcgccgcatccgtacaaaaaaaggcgat
gcaatggcttttgtaaccttacaggacgaaaccggcgtcgcatcggttacgctgttccca
aaagagtatgcacagtacaacgaaatgctggataaggatgccttgctagaaatccaagga
acagctgaaacccgccaaggcaagacgaccatcatctgcaaaaacatcgtatga
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