Planococcus maritimus: BBI11_07475
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Entry
BBI11_07475 CDS
T06704
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmat
Planococcus maritimus
Pathway
pmat03030
DNA replication
pmat03410
Base excision repair
pmat03420
Nucleotide excision repair
pmat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBI11_07475
03410 Base excision repair
BBI11_07475
03420 Nucleotide excision repair
BBI11_07475
03440 Homologous recombination
BBI11_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmat03032
]
BBI11_07475
03400 DNA repair and recombination proteins [BR:
pmat03400
]
BBI11_07475
Enzymes [BR:
pmat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBI11_07475
DNA replication proteins [BR:
pmat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBI11_07475
DNA repair and recombination proteins [BR:
pmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBI11_07475
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBI11_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ANU16866
LinkDB
All DBs
Position
1311923..1314541
Genome browser
AA seq
872 aa
AA seq
DB search
MSKKILLLDGNSLAYRAFFALPLLTNDNGVHTNAVYGFTTMLQKLLEEEKPTHMMVAFDA
GKTTFRNEAYSEYKGGRQKTPPELSEQFPYLRQLLSAYQIKQYELNNYEADDIIGTLSLQ
AEQAGDQVVVVSGDKDLTQLASDSTVVYITRKGITDIEKYTVEHIQEKYGLSPLQIIDMK
GLMGDSSDNIPGVPGVGEKTALKLLAKHGSVEGVYEAIEEQKGKMKEKLVENEELAHLSK
KLATIERQAPVEVSIGELDYTGPDQDELVRIWNELGFKSLLEKLDYTAEETEKKELHFEV
LERVDKSLLEDGMAVHLELYDEHYHSCDLLGVSLASETATYVIPMEVAEQSDEFKTWLED
PSAAKYMSDSKAATAAFLRKGIKIDGVDFDLMLGAYIVNPSLKYTDLSDIVREYGYSDVS
TNEQVYGKGAKKKVPEAEDLNEHMARKARAIFNVRPVVVDKLEENEQFDLYDKLELPLAK
VLGQMESLGVKVDREQLADMGVELKRKLGMIEQEIYALAGQEFNINSPKQLGVILFEQLG
LPAIKKTKTGYSTAADVLEKLEGKHEIIHHILMYRQLGKLLSTYIEGLLKEIHEDGKVHT
RFQQALTTTGRLSSTNPNLQNIPVRLDEGRKIRKAFVPSQPGWVMVAADYSQIELRVLAH
MSKDESLIEAFQSDMDIHTKTASDVFNVALEDVTSDMRRAAKAVNFGIVYGISDYGLSQN
LNITRKEAAEFIEQYLASFPGVQGYMTSIVEQAKKDGFVTTLMNRRRYLPDINSSNFNLR
SFAERTAMNTPIQGSAADVIKQAMIEMDTALEREGLQSKMILQVHDELIFEAPAEELEKL
MALVPEVMESAVKLNVPLKVDIATGDTWYDTK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaatcttattgctcgacggcaacagcttggcataccgcgcttttttcgcg
ctgccactactgactaatgacaacggtgtacatacgaatgcagtttacggattcacgaca
atgctgcagaagctattggaggaagaaaagccgacacatatgatggtggcgttcgacgcc
gggaaaacgactttccgcaacgaagcctattcagaatataaaggcgggcggcaaaagact
ccgccggaactgtccgagcagtttccctatttgcgccagctgctttccgcataccaaatc
aaacaatacgaactcaataattacgaggcggacgatattatcggcacgctgagcctgcag
gctgaacaagcaggtgaccaagtcgttgtcgtatcaggagacaaggatttaacccagctt
gcctctgattcgaccgttgtctatatcacccgtaaaggcatcaccgatatcgagaaatac
accgtggaacatatccaagagaaatacggcctgagcccgctgcagatcattgatatgaaa
ggtttgatgggtgattcctccgataatattccgggagttcctggcgtcggtgaaaagaca
gctttgaagctgctcgcaaaacatggctcagtagaaggcgtgtacgaagcgatagaagaa
caaaagggcaagatgaaggaaaagcttgtggaaaacgaagagcttgcgcatttgtccaaa
aaactagccacgatcgaacgacaagcgccggtcgaagtgtcgatcggcgaactcgattac
acaggacccgaccaagacgaattggtgcgtatctggaatgaacttgggtttaaatcttta
ttggaaaaactagattatacggcggaggaaaccgagaagaaagaactgcatttcgaagtg
cttgaaagggtcgataagagcttgcttgaagacggcatggcggtccatttagagctatat
gatgagcactatcacagctgcgatttactgggcgtctctttggcatctgaaacagcaaca
tatgttatcccgatggaagtggcggagcaatccgacgaattcaaaacttggctagaagat
ccatccgcggctaagtatatgtcggattcaaaagcggccactgcggcgtttcttagaaag
ggcataaaaatcgatggagtggacttcgacttgatgctcggggcttatatcgtcaatccg
tcactaaagtataccgacctttcggatatcgtccgggaatacggttattcggacgtgtcg
actaacgagcaagtctacggcaaaggcgcaaagaaaaaagttcctgaagctgaggatttg
aatgagcatatggctagaaaagcgagagccattttcaacgtgcggcctgtggttgttgac
aaattagaagaaaacgagcaatttgacttgtatgataaattggagctgccacttgcgaaa
gtgctcggccaaatggaatcgcttggcgtcaaagtggatcgtgaacaattggcagacatg
ggggtagaattgaaacgtaaactcggcatgatcgagcaagagatttacgcacttgccgga
caggaatttaatatcaattcaccgaagcaactaggagttatcctattcgagcagcttggc
ttaccagcgatcaaaaagaccaaaaccggctattcgacggctgcagatgtgctcgaaaaa
ttggaaggcaagcacgaaatcattcatcacattcttatgtatcgacagcttggaaaatta
ttgtcaacgtatatcgaagggttactgaaagagattcacgaggatggcaaagttcatacg
cgtttccagcaagccttaacgacgactggcaggctcagttccacaaacccgaacttgcag
aacatcccggtacgccttgatgaaggccgcaaaatccgcaaagccttcgtcccatcacaa
ccggggtgggtcatggttgcggcagattattcacagattgaattgcgtgtgctcgcccat
atgtcgaaagacgaaagtttgattgaagcattccaatcagatatggatattcataccaaa
acggctagcgacgtgttcaatgtagcgcttgaagacgtgacttcggatatgcgccgcgct
gccaaagcggtcaactttggcattgtctacggaattagtgactacggcttgtcgcaaaac
ttgaacatcacgcgaaaagaagcggctgaatttatcgaacagtatttggccagttttcca
ggagtccaaggctatatgacatcaatcgtcgaacaagcgaaaaaagacggattcgtcacg
accttgatgaaccgccgccgctatttaccggacatcaatagctcgaatttcaatttgcgc
agctttgcggaacggacggcgatgaatacgccgattcaaggaagtgcagccgatgtcatt
aaacaagcaatgattgagatggatacggcacttgaacgtgaagggcttcaatcgaaaatg
attctgcaagtgcacgatgagttaatctttgaagcacctgcagaagaattggagaagttg
atggcattggttccagaagtaatggagtcagcggttaagctcaacgtgcctctgaaagtg
gatattgccacaggagatacttggtacgatacgaaataa
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integrated database retrieval system
