Planococcus maritimus: BBI11_07480
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Entry
BBI11_07480 CDS
T06704
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmat
Planococcus maritimus
Pathway
pmat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBI11_07480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmat03400
]
BBI11_07480
Enzymes [BR:
pmat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BBI11_07480
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BBI11_07480
DNA repair and recombination proteins [BR:
pmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBI11_07480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ANU16867
LinkDB
All DBs
Position
1314555..1315424
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AA seq
289 aa
AA seq
DB search
MPELPEVEGVVRQIRPVSIGKRIVSVDVSETIRKSKHLGKEAILKRIGADSFQERLTGAQ
ILAVERRSKYIYMTLKSEQEFLLVNHLGMSGAWFFVDSLLSIPEDKFRRHVHVVLTLDDG
NLLAFSDIRRFGEMRVLETEADFPPLLLMAPEPFVDEALEWFLQQAESPKFRNKPIKEVI
MDGTVISGCGNIYATEALFRMRIHPKRAASRISRKRKVELFQAIATILLESIDAGGSTIS
DYRNINGESGSMQNRFGMYGKKACSFCGTETKTVKIAGRASVYCPSCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccggaagtagaaggggtggtccggcaaatccgccccgtatcgatcggc
aaacgcatcgtctctgttgatgtgtccgagacgatccgaaaatcgaaacacttgggaaaa
gaagcaatcttaaagcgaatcggagcagatagctttcaagaacgcttaactggtgcccaa
atactcgctgtcgaacgacgaagcaaatatatttatatgaccttgaaaagtgagcaggaa
tttttgctcgttaatcatctgggcatgtcgggggcatggtttttcgtcgatagcctgctg
tccattccagaagacaagttcaggcgacacgttcatgtagtactgacgcttgatgacggc
aatttactggcattctcagacatccggagatttggggaaatgcgtgtgctggaaacagaa
gcggatttccctcccttattgttgatggcgcctgaaccttttgtcgatgaagcactagag
tggtttttgcagcaggcggaaagtccgaagttccgcaacaagccaatcaaagaagtcatc
atggacggtacggtcatctcaggatgcggaaatatctacgcaacagaagcgttgtttcgg
atgagaattcacccgaaacgcgcagcgagtcggatcagccgtaagcggaaagtcgaacta
ttccaagcaatagccacgattttacttgaaagtatcgatgcaggcggcagcacaatttcc
gattaccgcaacatcaacggcgaatcgggcagcatgcagaatcgctttggaatgtatggc
aaaaaagcgtgctcattttgtggaacagaaacaaaaacagtgaaaattgcagggcgggcc
tctgtctattgcccgtcttgccagaaatga
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