Planococcus maritimus: BBI11_08345
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Entry
BBI11_08345 CDS
T06704
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pmat
Planococcus maritimus
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmat03019
]
BBI11_08345
03009 Ribosome biogenesis [BR:
pmat03009
]
BBI11_08345
Enzymes [BR:
pmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBI11_08345
Messenger RNA biogenesis [BR:
pmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBI11_08345
Ribosome biogenesis [BR:
pmat03009
]
Prokaryotic type
rRNA helicases
BBI11_08345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANU17026
LinkDB
All DBs
Position
1490902..1492197
Genome browser
AA seq
431 aa
AA seq
DB search
MTKFNEYRLKPFLLEAVEKLGFKEPTAIQKEMIPQIMSGNSAIGQSHTGTGKTHSFIIPI
VERIDVSKQEVQAVIAAPTRELGTQIFNEIQKLIGDSGIEVKSFIGGTDKQRSINKLKTQ
PHIVIGTPGRLKDLVNENALLVHTAKILVVDEADLAFDMGFIEEIDQVAGKMRDDLEMYV
FSATIPEKLKPFLKKYMANPAHIKIGDKRPAAEGLDFYLVPVRSKKKVERLQEIMKIINP
YLAIIFVNTRTNADYIAEELSKNGIRVGKIHGDLAPRERVKMMKQVRDLEYQYIVATDLA
ARGIDIQGVSHVINYELPEDLEFFIHRVGRTARAGLKGVAITMFSPEDEDAIVRVEKMGI
PFQQKDIVKGEFADMKERHGRKKRVRTENEADTKAKSMVHKPKSVKPMYKKKMKWKMDEI
KKAERRKNRKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattcaacgaataccgtctcaagccatttttgcttgaagcggtcgaaaaactc
ggttttaaagaaccgacagcaatccaaaaggaaatgattccacaaattatgagtggaaac
agtgccattggccagtcccatacaggtacaggcaagacccatagttttatcatcccaatc
gtcgaacgcatagatgtgtcgaaacaggaagttcaagcagtaatcgctgccccgacgcga
gaactgggaacgcaaattttcaatgaaattcagaaactgattggcgattccggcatcgaa
gtcaaatcatttatcggtggaacggacaaacaacgttcaatcaataaattgaaaacacag
ccgcatatcgtcatcgggacgccagggcgtttaaaagacctggttaacgaaaacgctttg
ctcgtccatacagcaaaaatcctagttgtcgatgaggcagacttggcatttgacatgggc
tttatcgaagaaattgaccaagtcgctggaaaaatgcgtgatgatttggagatgtacgtg
ttctctgcaaccatccctgaaaaattaaagcctttcttgaaaaaatacatggccaaccca
gcgcacatcaaaatcggtgacaagcgcccggctgctgaaggcttggacttttatctagtg
ccagtgcgcagcaagaagaaagtggagcgcctgcaagagattatgaagattatcaatcca
taccttgcgatcatctttgttaacacgcgtaccaatgccgattacatcgcagaggaatta
tcgaaaaacggcattcgcgtagggaaaatccatggagacttggcaccgcgcgaacgcgtt
aagatgatgaaacaagtacgcgatctggagtatcaatacatcgtagcgacagaccttgcc
gcacgtggaatcgatatccaaggcgtcagccatgtcatcaactacgaattgccggaagac
ctggaattcttcattcaccgtgtcgggcgtactgcgcgcgcagggcttaaaggcgtcgcg
atcaccatgttcagcccggaagatgaagatgctattgttcgcgtcgagaaaatggggatt
ccattccagcaaaaagatatcgtcaaaggtgaatttgctgatatgaaagagcgccacggc
cgtaaaaaacgtgtgcgtacggaaaatgaggccgatactaaggcgaaatcgatggtccat
aaaccgaaaagtgttaaaccgatgtacaagaagaaaatgaaatggaaaatggatgaaatc
aaaaaagcggaacgccgcaaaaaccgcaaaaagtaa
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