Planococcus maritimus: BBI11_10625
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Entry
BBI11_10625 CDS
T06704
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmat
Planococcus maritimus
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmat03016
]
BBI11_10625
Enzymes [BR:
pmat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBI11_10625
Transfer RNA biogenesis [BR:
pmat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBI11_10625
Prokaryotic type
BBI11_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU17446
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All DBs
Position
complement(1936234..1937163)
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AA seq
309 aa
AA seq
DB search
MEPNGILPLWKEPGMTSHDCVFRLRKILKTKKVGHTGTLDPQVDGVLPICLGRSTKVAEY
ITDQGKTYEAQVSIGFSTETEDAEGAIVEQDSSDKEITRKQLETVLASLTGDIEQIPPMY
SAVKVNGRKLYEYARKGEQVERPVRTVHIDSIELLDEATAWRGQNIQFRIRIRCGKGTYI
RTLAVQIGEALGYPAHMSQLTRTQSGSFTKEQCVTLAEVEEIAQNGDIDSILQPLSYGLS
IFPFEEIAADLLFSIKNGQVLEAHPILKTEPFVVFTYHGKPAALYKRHPEKAGKMKPEKM
FGFPPTDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgaatggaattcttccgttatggaaagaaccaggcatgacatcacacgactgc
gttttccgactgcgaaaaatcctgaaaacgaaaaaggtcggtcataccggaacgctcgat
ccgcaagtggatggcgttttgccgatttgtttagggcggtcgaccaaagtggccgaatac
atcacagatcaaggaaaaacgtatgaagcacaagtatcaattggcttttccacagaaaca
gaagacgcggaaggggcaatcgtcgagcaagacagcagtgacaaggaaataacgcgcaag
caattggaaacggtgttggcaagcttgacgggcgatatagaacagattccaccgatgtat
tcggcggtcaaagtgaacggcagaaagctttacgaatatgcccgtaaaggggaacaagta
gaacgtccggtacgcacggtacacattgactcgattgaattattggacgaggcaaccgcg
tggagagggcagaacatccagttccgcatccgtatccgttgcggcaaagggacttacatt
cgaacgctcgctgtccaaatcggtgaagcgctcgggtatccagcacatatgtcacagcta
acgcgcacacaatccggcagttttacaaaagaacaatgtgtgacgcttgccgaagtagag
gaaattgcgcaaaatggggatatcgattctattttgcagccattgtcatatggcttgagt
attttcccttttgaggaaattgcagcggatttgctgttcagcatcaagaatggacaagtg
ctcgaagcacatccaatcttgaaaacggaaccgtttgtcgttttcacctatcatggcaaa
ccagcagcgttatacaaaaggcatcctgaaaaggctggcaaaatgaaacccgaaaaaatg
tttggatttcctccaacggacgaggtgtaa
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