Planococcus maritimus: BBI11_11790
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Entry
BBI11_11790 CDS
T06704
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pmat
Planococcus maritimus
Brite
KEGG Orthology (KO) [BR:
pmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmat03400
]
BBI11_11790
Enzymes [BR:
pmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBI11_11790
DNA repair and recombination proteins [BR:
pmat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BBI11_11790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
CARD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANU17666
LinkDB
All DBs
Position
complement(2173795..2177400)
Genome browser
AA seq
1201 aa
AA seq
DB search
MIPKKPNDATWTDEQWQAIWAKGQDMLVSAAAGSGKTAVLINRMIEKVLDEQDPISVDEL
LVVTFTNASAAEMRHRMSAALEQAVAAQPDSVHLKKQLRLINKAQISTLHSFCLQVVKQY
AYLLEIDPGFRIAGDTEAALLRDDVMEAVLESAYEGEGRDKVYRLADSFTSDRSDQAMEI
LLGKLYDYSRVHPKPEAWLEQLPQLYDVSEHATVDELPFMNDLKMTIRHSFEAALDLLDE
GWELATQPDGPHILEEHFRMDATLIRTALDALDESWASLHAYARNIKWERLASVKKDSCD
PQLAEEAKARRNEAKKLINDVKDGYFTRAPERLLGEMREMAPLMRTLVDLTKRFAKDYKA
LKIDRGLVDFSDLEHYALEILSEDGKPSAIAQDYRTRFKEVLVDEYQDTNMLQETILSLV
KSGTEQDGNLFMVGDVKQSIYRFRLAEPMLFLGKYSRFSREAQETGLRIDLNANFRSRKE
VLDGTNYIFSQIMGERVGEISYDEDAALKPKAPYPEADVPIHLTLIHEPETEEGEDVSVD
MDKSQWEARWIAQKIRQMMDAGTLVHDPWSGKERPLEYRDVVVLMRSMTWSSDFSDEFKA
AGVPLYAELSGGYFDALEVMIMLDTLRVIDNPYQDIPLAAVLRAPFFGLQENELAAIRLA
DAKGTFYDALKAFIRIGTMEQATRLKLSRFTNSLQKWRDLARRGSLAELIWKVYLDTNYY
EMAGAMSNGKQRQANLRALHDRALEYEQTAFRGLFRFLRFIDRMRERGDDLGTAKSLSEK
ENVVRLMTVHKSKGLEFPVVFFAGTGRPFNEMDFHKPYLFDQQYGLAVKAVNPETRIEYT
SLPYLAVKEMKQLQMKAEEMRVLYVAMTRAKEQLYLTASVKDIDRLLEKWKTTSGDLLLP
DFKRSRAKSYLDWIGPAVTRHPDAKQLHTGGEVIEHHSRFDIDIVETASLEELQPVLEAP
EDRPEADADAALIYSRFDFSYPHQAAVEKRSKQSVTEMKRLQLLQSLDEPESFIQEYQPK
TQKKAPHRPDFLMDRKLSAADVGTAVHTVMQHLPLERRMNLAEIRQFLEELAGREILTEE
EAQAVRAEQVETFFDSPIAQRLIAAEDVRREVPFTYARADEDGDYQIVQGIVDCLFKENG
EWVLLDYKTDQTRGMGNVQSVMKERYAIQLSIYQEAVEAILRIPIKERVLYLFSSNEEVK
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgataccgaaaaaaccgaatgatgccacatggacagacgaacaatggcaggcgatttgg
gccaaggggcaggacatgcttgtatcggccgcggcaggctctgggaaaacggctgtattg
atcaatcggatgattgaaaaggtactggatgagcaagatccgatatcagtcgacgagcta
ttggttgtgacctttacgaatgcctctgcagcagaaatgcgccaccgtatgtctgcggct
ctcgagcaggcggtcgctgcacagccagactcggttcatttgaaaaaacagctgaggctg
atcaataaagctcaaatttcgaccttgcattcgttttgcttgcaagtggtgaagcaatac
gcctatctattggaaatcgacccaggattccgtattgctggagatacagaagcggcctta
ttgcgtgacgatgtgatggaagcagtgcttgaatctgcttacgagggggaagggcgcgac
aaagtttacaggcttgcggacagttttacttctgaccgcagcgaccaggccatggagatt
ttactagggaagttatatgattattcacgtgtgcaccctaaaccggaggcttggcttgaa
caattgccacagctttacgatgtgtcggaacatgccacagttgacgaattgccgttcatg
aatgatttaaaaatgacgatacgtcatagttttgaggcagcgctcgatttactcgacgaa
ggctgggagttagctacgcagccggacggccctcacatcttggaagagcatttccggatg
gatgctacactgatccgtacggcactcgacgctttggatgagtcttgggcgtcgcttcac
gcttatgcgcgaaacattaaatgggaacgcttagcttccgtgaaaaaagattcctgcgac
ccgcagttagcggaagaagcgaaagcgcggagaaatgaagcaaaaaaactgattaatgac
gtaaaagacgggtatttcacccgcgctcccgaacggcttcttggggaaatgcgtgaaatg
gcgccgctcatgagaacattggttgatttgacaaagcgctttgcaaaagattacaaagcc
ctgaaaatcgatcgcggtttggtagatttctcggatttggagcattatgcactggaaatc
ttaagcgaggacgggaaaccttcagcgatagcacaagattaccgaacacgctttaaggaa
gtcttagtcgacgaataccaggatacgaatatgctgcaagaaacgatacttagcctggtg
aagtccggtacagaacaagatggcaatttgtttatggttggggatgtgaaacaatcgatc
taccgtttccgtttggcggagccgatgctgttcctcggcaagtattcccgctttagccgg
gaagcgcaagaaacgggcctgaggattgacttgaacgccaatttcaggagccgcaaagaa
gtactcgatggcaccaattacatcttttcgcagattatgggcgaacgcgttggcgaaatc
agctacgacgaagatgcggcattaaagccgaaagcgccttatcctgaagcggatgtgccg
atccacttgacgctcatccatgaaccggaaaccgaagaaggcgaagacgtatctgtggat
atggacaaatcgcaatgggaagctcgctggattgcacagaaaatccgccaaatgatggat
gcgggaacgcttgtgcacgatccatggagcggcaaagagcgcccgcttgaatatcgtgac
gtggttgttttgatgcgttcaatgacttggtccagtgatttttccgatgaatttaaagcg
gctggtgtgcctctatatgcggaattgagcggcggttatttcgatgcactcgaagtgatg
atcatgctcgatacattgcgtgttatcgacaatccgtatcaggacattccgcttgccgcc
gttttgcgtgcgccgtttttcggtcttcaggaaaacgagctcgcagcaattcgcttagct
gatgcgaaaggcactttctacgatgcgttaaaagcgtttatccgcatcggcactatggaa
caagctacgcgccttaagttgtcgcgatttactaatagcttgcagaaatggcgtgatttg
gcgcgaagaggctcgttagcagagttgatttggaaagtttatttggatacgaactattac
gaaatggcgggtgccatgtcaaatggcaaacagcgccaagctaatttgcgtgctcttcac
gaccgtgcacttgaatacgaacaaaccgcttttcgcggcttgttccgcttcttgcgtttt
atcgaccgcatgcgagaacgcggagacgaccttgggactgccaaatcattgagtgaaaaa
gaaaacgtcgtccggctgatgaccgtccacaaatcgaaaggcttagagtttccagtggtc
tttttcgcagggaccggacggccattcaatgaaatggatttccataaaccgtatttattc
gaccagcaatacggactcgcggtcaaggctgtaaatccggagacgcgaattgaatatacg
tcgctgccgtatctggctgtcaaagagatgaagcagctacaaatgaaggcggaagagatg
cgcgtcttgtatgtagccatgacacgcgcgaaagaacagctttacttaactgcttcggta
aaagatattgaccgcttacttgaaaagtggaaaacgacttctggcgatctgctgttgcct
gattttaaacgctcgcgtgcaaaatcgtatttggattggattggtccggctgtcacgagg
catcctgatgcaaagcaactgcacacgggtggtgaagtgattgagcatcattcgcgtttt
gacattgatattgtcgagaccgcttctttagaagagctgcagcctgtactggaagcgcct
gaagaccgtccagaagccgatgccgatgccgcattgatctacagccgtttcgatttttcc
tatccccaccaggctgctgttgaaaagcgttctaagcagtcggtaaccgaaatgaaaagg
ctgcagcttttgcagagtttggatgagcccgaatcattcatccaagaatatcaaccgaaa
acacagaaaaaggcgccccatcgcccagacttcttgatggacagaaaactgtccgcagca
gacgtcggaacggctgtccatacggtcatgcagcatttgccgcttgaacgccggatgaat
ctagcggaaatccgtcaatttttagaggaattggcagggcgtgaaattttgacagaggaa
gaagcgcaggcggtcagagccgaacaagtcgaaacctttttcgatagcccaatcgcacag
cgcttgatagctgcagaggatgtcagaagagaagttcctttcacgtatgcccgtgctgat
gaagacggggattatcaaattgtccaagggattgtcgattgcctgtttaaagaaaacggg
gagtgggtcttgcttgattacaaaaccgatcaaacccgcggaatgggcaatgttcaatca
gtaatgaaagagcgttacgccatccaattatccatttaccaagaagcagtggaagccatt
ttgcgcattccgataaaagaacgcgttttgtatctcttctcttcaaacgaagaagtgaaa
gtctag
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