Paracoccus marcusii: CP157_00017
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Entry
CP157_00017 CDS
T07681
Symbol
udg_1
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmau
Paracoccus marcusii
Pathway
pmau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP157_00017 (udg_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmau03400
]
CP157_00017 (udg_1)
Enzymes [BR:
pmau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CP157_00017 (udg_1)
DNA repair and recombination proteins [BR:
pmau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP157_00017 (udg_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QXI62357
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All DBs
Position
complement(19528..20949)
Genome browser
AA seq
473 aa
AA seq
DB search
MIRVTLPRFGRFDAWRQAARDLASARVPMEDVTWADPDTPPDLFGADPAPPPGDYPVIAT
QEFLQLARQVASHSDPERWSLLYGALMRAQDDRRFLSNPADPMMDRLSRMAKSVRRDIHK
MHAFVRFHELPSDGPRRAFGAWFEPEHPILEAGTPFFAKRFADMDWLIATPEGTARFDGD
TIAYDGPAPRPDLPDDASHDLWQTYFANIFNPARIKTNAMRSEMPKKYWKNLPETRLIPD
MLADAPRRVQAMRDAGATDAPAFAPKITARLRQQPDDSIPDTLEQAASQAARCTRCELCH
AATQTVWGQGDPAARLMLVGEAPGDQEDLAGLPFVGPAGQLLHRTMAEAGLAPDRAWMTN
AVKHFRFTPRGKRRLHQTPDRDHVDQCRWWLDLERRMVAPRLTVALGATAAFALTGNRKP
LTPRRGLIEPARDGGPVLITWHPSLILRLPPDRAPAALAELRADLAQAVQMVA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatccgggtcacgctgccgcggttcggacgctttgacgcctggcgtcaggccgcccgc
gatctggccagcgcacgcgtcccgatggaggacgtgacctgggccgaccccgacacgccc
cccgaccttttcggcgccgatccggccccgccgccgggcgattatccggtgatcgccacg
caggagttcctgcaactggcccgtcaggtcgccagccattcggacccggagcgctggtcg
ctgctgtacggggcactgatgcgggcgcaggacgatcggcgctttctgtccaatcccgcc
gatccaatgatggaccgcctgtcgcgcatggcgaaatcggtgcgccgcgacatccacaag
atgcacgcctttgtccggtttcacgaactgccctcggacgggccgcgccgggccttcggt
gcgtggttcgaacccgaacaccccatcctggaggcgggcacgccgttctttgccaagcgg
ttcgccgacatggactggctgatcgccacgcccgaaggcaccgcccggttcgacggcgac
accatcgcctatgacggcccagccccgcgccccgatctgcccgacgacgccagccatgac
ctgtggcagacctattttgccaatatcttcaaccccgcgcgcatcaagaccaatgcgatg
cggtccgagatgcccaagaagtactggaagaacctgcccgaaacccggctgatccccgac
atgctggccgatgcgccacgtcgtgttcaggccatgcgcgacgcgggggcgaccgatgcg
ccggcctttgcgcccaagatcaccgcccgcctgcgccagcagcccgacgacagcatcccc
gacacgctggagcaggccgcatcccaggccgcccgctgcacccggtgcgagctgtgtcat
gcggccacccagaccgtctgggggcagggcgatcctgccgcccgcctgatgctggtgggc
gaggcgccgggcgatcaggaggatctggcgggcctacccttcgtgggccccgcgggccag
cttctgcaccgcaccatggccgaggccgggctggcccccgaccgggcctggatgaccaat
gcggtcaagcatttccgtttcaccccgcgcggcaagcgccgcctgcaccagacgcccgac
cgcgaccatgtcgatcagtgccgctggtggctggacctggaacgccgcatggtcgcgccg
cgcctgaccgtggccctgggggcaacggcggccttcgcactgaccggaaaccgcaagccg
ctgacgccgcgccgcggtctgatcgaaccggcacgcgacggcggccccgtcctgatcacc
tggcatcccagcctgatcctgcgcctgccgcccgaccgcgcgcctgcggccttggccgaa
ctgcgcgccgatctggcgcaggccgtgcagatggtggcctga
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