Paracoccus marcusii: CP157_00344
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Entry
CP157_00344 CDS
T07681
Symbol
rnd_1
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmau
Paracoccus marcusii
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmau03016
]
CP157_00344 (rnd_1)
Enzymes [BR:
pmau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP157_00344 (rnd_1)
Transfer RNA biogenesis [BR:
pmau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP157_00344 (rnd_1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QXI62669
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All DBs
Position
355736..356350
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AA seq
204 aa
AA seq
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MSIHLYPNDLPDDLVLGPVVAIDTETMGLDPRRDRLCLVQLSSGDGEAHLVQIDRGQTEA
PNLTKLLTDPKVVKLFHFGRFDIAALENAFGVVTSPVWCTKIASRLVRTFTDRHGLKYLL
QELVGVDVSKQQQTSDWGAADLSDAQLEYAASDVLHLHKLKDALEERLKRENRLGLAQAC
FDFLPARAHLDLLGWGEEGDIFRH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccatctgtacccgaacgaccttcccgacgatctggtgctgggcccggtcgtg
gccatcgacaccgagacgatgggccttgacccgcgtcgtgaccggctgtgcctggtgcag
ctgtcgtcgggcgacggcgaggcgcatctggtccagatcgaccggggccagaccgaggct
ccgaacctgaccaagctgctgaccgaccccaaggtggtcaagctgttccatttcggccgt
ttcgacatcgccgcgctggagaacgcgttcggggtggtcacctcgcccgtctggtgcacc
aagatcgcctcgcggctggtgcggacgttcaccgaccggcacgggctgaaatacctgctg
caggagctggtgggcgtcgatgtcagcaagcagcagcagaccagcgactggggcgcggcc
gacctgtcggacgcgcagctggaatatgccgcgtcggacgtattgcacctgcacaagctg
aaggatgccctggaggagcgactgaagcgcgagaacaggctgggcctggcgcaggcctgc
tttgactttctgcccgcgcgtgcccatctggacctgctgggctggggcgaagagggcgac
atctttcgccactga
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