Paracoccus marcusii: CP157_00603
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Entry
CP157_00603 CDS
T07681
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmau
Paracoccus marcusii
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmau03032
]
CP157_00603 (topA)
03400 DNA repair and recombination proteins [BR:
pmau03400
]
CP157_00603 (topA)
Enzymes [BR:
pmau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CP157_00603 (topA)
DNA replication proteins [BR:
pmau03032
]
Prokaryotic type
DNA Topoisomerases
CP157_00603 (topA)
DNA repair and recombination proteins [BR:
pmau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP157_00603 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXI62914
LinkDB
All DBs
Position
complement(601558..604275)
Genome browser
AA seq
905 aa
AA seq
DB search
MPVVVVESPAKAKTIEKYLGSDYRVLASFGHVRDLPPKDGSVDTDHDFDMKWEVAADSRK
HLKAIKDALKDDQTLILATDPDREGEAISWHLLEALAPALKKGSAVSRVTFNAITKTAVT
EAMAKPRQIDQPLVDAYLARRALDYLVGFKLSPVLWRKLPGAKSAGRVQSVCLRLIVDRE
MEIEAFKAREYWSVHARLATPGGDEYDATLVSLAGKKLDRFDLAAADQAAMALSAVASRD
LKVASVAAKPASRNPWPPFMTSTLQQEASRKMGMGAKACMSAAQRLYEAGLITYMRTDGI
DMAPEAVMAARDAIKAKFGDKYLPKSPRMYKNKAKNAQEAHECIRPTDMMLSPDKLKITA
EDQRKLYDLIWKRTIASQMEAARMERTTVEIASPDDQVGLRATGQVMLFDGFLRVYDQGR
DDDDGEDSARLPAITEGEAARLVAHAFDDELAKAREKGGDAVAAPAGLKAGPGLLVSDKA
QAAARQHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDREYVRKDKNRLIAEDK
GRLVTIFLLKYFPRYVSYDFTADLENELDEISAGDRLWREVLSRFWKDFSKALEGTSELR
ITEVLEAIDDALAPHLYPPRADGGDPRECPLCGQGRLNLKTARSGGAFIGCTNYPECRYT
RPLSAPDGEAPIGDRVLGEDAGDQISLKTGRFGPYVQRGEATEEAPKPPRASIPKGWEVA
TLDLDQAVQLLALPRPVGPHPEDGVLIEAGIGRFGPYVKHGSKYANIADVDEVFTIGMNR
AVEVLAAKQTRGRAAAAAPLRELGEHPDGGPIQILGGKYGPYVKWAKVNATLPRDVTPED
LTVEQALELIAAKAAKSPSKAKKPAAKKAAPKAAAKKPAAKKPAAKKPAAKKPAAKKAAA
KPEAE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatccccggccaaggccaagaccatcgagaaatacctgggt
tccgactatcgggttctggccagcttcggccatgtccgcgacctgccgcccaaggacggc
agtgtcgacaccgaccatgatttcgacatgaaatgggaggtcgcggccgacagccgcaag
cacctcaaggccatcaaggacgcgctgaaggacgaccagacgctgattctggccaccgac
cccgaccgcgagggcgaggcgatcagctggcacctgctggaggcgctggcaccggccctc
aagaagggcagcgcggtcagccgcgtgaccttcaatgccatcaccaagaccgccgtgacc
gaggcgatggccaagccgcgccagatcgaccagccgctggtcgacgcctatctggcgcgc
cgcgcgctggattatctggtggggttcaagctgtcgccggtcctgtggcgcaagctgccg
ggcgcaaagtcggcgggccgcgtccagtccgtctgcctgcgcctgatcgtcgaccgcgag
atggagatcgaggccttcaaggcacgcgaatactggtccgtccatgcccgcctggcgacc
ccgggcggcgacgaatacgacgccacgctggtgtcgctggccggcaagaagctggaccgg
ttcgacctggccgccgctgatcaggccgcgatggcgctgagcgcggtggccagccgcgac
ctgaaggtagcgtcggtcgcagccaagcccgccagccgcaacccctggccgcccttcatg
acctcgaccctgcagcaggaggccagccgcaagatgggcatgggcgccaaggcctgcatg
tcggcggcgcagcgcctgtacgaggccgggctgatcacctacatgcggaccgacggcatc
gacatggcccccgaggccgtgatggccgcccgcgacgcgatcaaggccaagttcggcgac
aagtacctgccgaaatcgccgcgcatgtacaagaataaggccaagaacgcgcaggaggcg
catgagtgcatccggccgaccgacatgatgctgtcgccggacaagctgaagatcaccgcc
gaggatcagcgcaagctgtacgacctgatctggaagcggaccatcgccagccagatggag
gccgcccggatggagcggaccacggtcgagatcgccagccccgacgaccaggtcggcctg
cgcgccaccggccaggtgatgctgttcgacggcttcctgcgcgtctatgaccagggtcgg
gacgacgacgacggagaggacagcgcccgcttgcccgcgatcaccgagggcgaggccgcg
cgtctggtcgcccacgccttcgacgacgaactggccaaggcccgcgagaagggcggcgac
gcggtcgcggcccccgcggggctgaaggccgggccgggcctcttggtcagcgacaaggcc
caggccgcagcgcgccagcatttcacccaacccccgccgcgctataccgaggccacgctg
gtcaagcggatggaagagctgggcatcggacgcccgtcgacctatgccagcatcgtcacc
acgatccaggaccgcgaatatgtccgcaaggacaagaaccgcctgatcgccgaggacaag
ggccggttggtcacgatcttcctgctgaagtatttcccgcgttacgtcagctatgacttc
accgccgacctggagaacgaactggacgagatcagcgccggcgaccgcctgtggcgcgag
gttctgagccgcttctggaaggacttctccaaagcactggagggcacgtccgagctgcgc
atcaccgaggtgctggaggcgatcgacgacgcgctggcgccgcatctctatccgccgcgc
gcggatgggggcgatccgcgcgaatgcccgctgtgcggtcagggccgcctgaacctcaag
accgcgcggtcgggcggggccttcatcggctgcaccaactatccggaatgccgctatacc
cgccccctatccgccccggacggagaggcgcccatcggcgaccgcgtgctgggagaggat
gcgggcgatcagatcagcctcaagaccgggcgtttcggcccctatgtccagcgcggcgag
gcgaccgaggaggcccccaagcccccccgcgcgtcgatcccgaagggatgggaggtcgcg
accctggacctggatcaggccgtgcagctgctggccctgccccgccccgtcggtccccac
cctgaggacggggtgctgatcgaggccggaatcggccgctttggcccctatgtgaagcac
gggtcgaaatacgccaacatcgccgatgtcgacgaggtcttcaccatcggcatgaaccgc
gcggtcgaggtgctggctgccaagcagacccgcggccgcgccgcagcggccgcaccgctg
cgcgagctgggagagcatccggacggcggtccgatccagatcctgggcggcaagtacggc
ccctatgtcaaatgggccaaggtcaacgcgaccctgccacgcgacgtcacccccgaggat
ctgaccgtcgaacaggcgctggagctgatcgcggccaaggctgcgaaatcgccgtccaag
gccaagaaaccggccgccaagaaggccgcgcccaaggcagccgccaagaagcctgccgcc
aagaaaccggcggcaaagaagcccgcggccaagaagcctgccgcgaaaaaggccgcggcc
aagcccgaggccgagtag
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