Paracoccus marcusii: CP157_01367
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Entry
CP157_01367 CDS
T07681
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmau
Paracoccus marcusii
Pathway
pmau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP157_01367 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmau03019
]
CP157_01367 (deaD)
03009 Ribosome biogenesis [BR:
pmau03009
]
CP157_01367 (deaD)
Enzymes [BR:
pmau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CP157_01367 (deaD)
Messenger RNA biogenesis [BR:
pmau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP157_01367 (deaD)
Ribosome biogenesis [BR:
pmau03009
]
Prokaryotic type
rRNA helicases
CP157_01367 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QXI63646
LinkDB
All DBs
Position
1348042..1349949
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AA seq
635 aa
AA seq
DB search
MTGLNFPAPLQAALADKGYETLTAVQSAVLAPEAAGRDVLVSAQTGSGKTVAFGLAMGAD
LLDDDRIIAGELPLALAIAPTRELALQVARELEWLYAGTGAQIATCVGGMDYRNEKRALQ
RGAQIVVGTPGRLRDHIDRGSLDLSDLRAAVLDEADEMLDLGFREDLEFILGAAPVERRT
LMFSATVPSAIEKLARDFQRDALRIAAMGEARQHGDIAYRAYTVTARDREPAIFNLLRIH
EAQTAIVFCKTRANVNHLLARMSNRGFKCVALSGELSQQERTHALQALRDGRARVCIATD
VAARGIDLPGLELVIHADLPTNPDTMLHRSGRTGRAGSKGVSALIVPSADYRRAQRLLQN
AKVSAEWLDAPTADEVRARDDQRMLDHPGLHEPVGDDAALAAQLLEQFSAEQVAAAFLRL
WREGRPAAEELSEAHAPPAPMAPRAQREFGPSVWFTLSVGHSGRAEARWLLPKVCDAGGI
TRDSIGAIRVKQDLSYIQIASEVAAKFGDFIEITPEVTMRRMDGAPDLDAPIERAPRAPR
TDNRSEGRKPAPRAKHAASDEGHHARVKSARGGWLPDDAPAELRETGPHAAVKSWKKKSS
ADAGKGPKPAWAKSRPAGDKAGAPKAHRKGPKRPA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactggactgaatttccccgcgccgcttcaggcggcgttggccgacaagggctatgag
acgttgactgccgtgcagtcggcggtgctggcgcctgaggccgcgggccgcgacgtgctg
gtctcggcccagaccgggtcgggcaagaccgtggcctttggcttggcgatgggcgcggac
cttctggacgacgaccgcatcatcgcgggcgagttgccgctggccctggccatcgcgccc
acgcgcgaactggcgctgcaggtcgcacgcgagctggaatggctttatgccgggacgggg
gcgcagatcgcgacctgcgtgggcggcatggattatcgcaacgaaaagcgcgccctgcag
cgcggcgcgcagatcgtggtcggcacgcccggccgcctgcgcgaccatatcgaccggggc
agcctggacctgtcggacctgcgcgcggccgtcctggacgaggccgacgagatgctggac
ctgggcttccgcgaggatctggagttcatcctgggcgccgccccggtcgagcggcgcacg
ctgatgttctcggccacggtgccgtcggcgatcgagaagctggcccgtgatttccagcgc
gacgccctgcgcatcgccgcaatgggcgaggcgcgccagcatggcgacatcgcctatcgc
gcctataccgtgaccgcccgcgaccgcgagcccgcgatcttcaacctgctgcgcatccac
gaggcgcagaccgccatcgtcttctgcaagacgcgggccaacgtgaaccatctgctggcg
cgcatgtcgaaccggggcttcaaatgcgtggccctgtcgggcgagctgtcccagcaggag
cggacccacgccctgcaggcgctgcgtgacgggcgcgcccgcgtctgcatcgccaccgac
gtggccgcgcgcggcatcgacctgccggggctggagctggtgatccacgcggacctgccg
accaaccccgacacgatgctgcaccggtcgggccgcactgggcgtgcgggctccaagggc
gtgtccgcgctgatcgtgccgtcggccgattatcgtcgggcacagcgtctgctgcagaac
gccaaggtctcggccgaatggcttgacgcgccgaccgcggacgaggtgcgggcgcgcgat
gatcagcgcatgctggaccatcccggcctgcacgaacccgtgggcgacgacgccgccctg
gccgcgcagctgctggagcagttcagcgccgaacaggtcgccgccgccttcctgcgcctg
tggcgcgaaggccgccccgctgccgaggaactgtccgaggcgcatgcgccccccgcgccg
atggccccccgtgcgcagcgcgagttcggcccttcggtctggttcacgctgtcggtcggt
cattccggtcgggccgaggcgcgttggctgctgcccaaggtctgcgatgcgggcgggatc
acccgcgacagcatcggcgcgatccgcgtcaagcaggacctgtcctatatccagatcgcg
tcggaagtcgccgccaagttcggcgatttcatcgagatcaccccggaggtcaccatgcgc
cgcatggacggcgcccccgacctggatgcgccgatcgagcgggcgccccgtgccccgcgc
accgacaaccgttccgagggtcgcaagcccgcgccgcgtgccaagcacgctgcgtcggac
gagggtcaccacgcccgcgtcaagtccgcccgcggcggctggttgcccgatgatgccccc
gccgaactgcgcgagaccggaccgcatgcggccgtgaaatcgtggaagaagaagtcgtcg
gccgatgctggcaagggccccaagccggcctgggccaagtccaggcccgccggcgacaag
gcgggtgcccccaaggcgcatcgcaagggacccaagcggcccgcctga
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