Paracoccus marcusii: CP157_01382
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Entry
CP157_01382 CDS
T07681
Symbol
rhlE_1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmau
Paracoccus marcusii
Pathway
pmau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP157_01382 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmau03019
]
CP157_01382 (rhlE_1)
Enzymes [BR:
pmau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CP157_01382 (rhlE_1)
Messenger RNA biogenesis [BR:
pmau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP157_01382 (rhlE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CMS1
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QXI63659
LinkDB
All DBs
Position
complement(1362682..1364055)
Genome browser
AA seq
457 aa
AA seq
DB search
MEQNNTRRRPNRGGKSTPARPPIQANEGRRAPAREPVITGPFADMGIDHRINANIIAMGL
TTPTPIQEQGIPAIVQGRDVLGLAQTGTGKTAAFGLPMLTRLINYGKKPDPKTCRALILA
PTRELATQIATNIDAYAEGTPIRSFRVVGGASINTQTERLSRGVDVLIATPGRLMDLIER
RAISLEATTYLVLDEADQMLDIGFIHTLRKIARMLPRERQTLMFSATMPKLMSELSDTYL
TNPVKVAVNPPGQAAKKIEQGVHFVSQGDKATLLAEYMSKHTNELAMVFGRTKHGCEKLA
KLLEKWGFAVAAIHGNKSQGQRERALEAFRKGETKVLVATDVAARGLDIPEVAHVYNYDL
PNVPENYVHRIGRTARAGRDGRAVAFCSPAELGELRAIEKAMKNAIPVIGGDVPSAAAAA
AAGPAGGAQRGRGKPMDGGAHKRPARRPSRAPKSRTA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaacaacacccgccgccgccccaaccgtggcggcaagtccacccccgcccgc
ccgccgatccaggccaacgaaggccgccgcgcccccgcccgcgaacccgtcatcaccggt
cccttcgcggatatggggatcgaccaccgcatcaacgccaacatcatcgcaatgggcctg
accacgcccaccccgatccaggaacagggcatccccgccatcgtgcagggccgcgacgtg
ctgggcctggctcagaccggcaccggcaagacggcggccttcggcctgccgatgctgacc
cgcctgatcaactatggcaagaagcccgaccccaagacctgccgcgcgctgatcctggca
ccgacccgcgaactggccacccagatcgcgacgaacatcgacgcctatgccgagggcacg
ccgatccggtcgttccgcgtcgtgggcggcgcctcgatcaacacccagaccgagcggctg
tcgcgcggcgtggacgtgctgatcgccaccccgggccgcctgatggacctgatcgagcgt
cgcgcgatcagcctggaggccaccacctatctggtgctggacgaggccgaccagatgctg
gacatcggcttcatccacacgctgcgcaagatcgcgcggatgctgccccgtgaacgccag
acgctgatgttctcggccaccatgcccaagctgatgtcggaactgtcggatacctacctg
accaacccggtcaaggtcgccgtcaacccgccgggccaagccgccaagaagatcgaacag
ggtgtccacttcgtcagccagggcgacaaggccacgctgctggccgaatacatgtccaag
cacaccaacgagctggcaatggtcttcggccgcaccaagcacggctgcgaaaagctggcc
aagctgctggagaagtggggcttcgcggtcgccgcgatccacggcaacaagagccagggc
cagcgcgagcgtgcgctggaggccttccgcaagggagagaccaaggtgctggtcgccacc
gacgtggccgcccgcggcctggacatccccgaggtcgcgcatgtctacaactacgacctg
ccgaacgtccccgagaactatgtccaccgcatcggccggacggcgcgtgcgggtcgtgac
ggtcgcgccgtggccttctgctcgcccgccgaactgggagagctgcgcgccatcgagaag
gccatgaagaacgccattccggtgatcggcggcgacgtgccctcggctgctgcggccgca
gcggcgggtcctgccggcggtgcacagcgcggacgcggcaagccgatggacgggggcgcc
cacaagcgtccggcacgccgcccgtcgcgcgcgcccaagagccgcaccgcctga
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