Paracoccus marcusii: CP157_02268
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Entry
CP157_02268 CDS
T07681
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pmau
Paracoccus marcusii
Pathway
pmau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CP157_02268 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmau03021
]
CP157_02268 (rpoD)
Transcription machinery [BR:
pmau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP157_02268 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QXI64500
LinkDB
All DBs
Position
complement(2251138..2253111)
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AA seq
657 aa
AA seq
DB search
MAAKDDDHDKTDKDDNAHTLDMSQAAVKKMIAEARERGYITYDQLNAVLPPEQVSSEQIE
DVMSMLSEMGINVIEDDDAAEESEGGAIVTTGSGSRELAVSASETEKLDRTDDPVRMYLR
EMGSVELLSREGEIAIAKRIEAGRNTMIAGLCESPLTFKAITLWREELLDEEILLRDVID
LETTFGQSMDDEEAEEVELTVEGEASPAATKREEFDADGNPLRVEDDEDEDEGANLSLAA
MEASLKPKVLETLEAIAHHYEGLADMQDQRMSATLNEDNSFSASAESDYQNLRSEIVVLV
NSLHLNSGRIEALVDQLYGINRRIVTIDSGMVKLADAARINRREFIDAYRGSELDPNWVD
RMSAQAGRGWQALFDRSRDQVERLRGDMAEVGQYVGVDIEEFRRIVAQVQRGEKEARQAK
KEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIR
QAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRK
VMKIAKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLASLTPREE
RVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggacgatgaccacgacaagaccgacaaggacgacaatgcccatacgctg
gacatgagccaggcggcggtcaagaagatgatcgccgaggcacgcgagcgtggctacatc
acctacgaccagctgaacgccgtcctgccgcccgagcaggtcagcagcgagcagatcgag
gacgtcatgtcgatgctgtccgaaatgggcatcaacgtcatcgaggacgacgacgccgcc
gaggagtcggagggcggggccatcgtcaccaccgggtccgggtcgcgcgaactggccgtg
tcggccagcgagaccgaaaagctggaccgcaccgacgaccccgtccgcatgtacctgcgc
gagatgggatcggtcgagcttctctcccgcgagggcgagatcgccatcgccaagcggatc
gaggcgggccgcaacaccatgatcgcgggcctgtgcgagagcccgctgacgttcaaggcc
atcacgctgtggcgcgaggagcttctggacgaagagatcctgctgcgcgacgtcatcgac
ctcgagaccaccttcggccagtccatggacgacgaggaggccgaggaggtcgaactgacc
gtcgagggcgaggccagccccgccgcgaccaagcgcgaggagttcgacgccgacggcaac
cccctgcgcgtcgaggatgacgaggacgaggacgagggcgccaacctgtcgctggccgcg
atggaggcaagcctcaagcccaaggtcctggagacgctggaagccatcgcccatcactac
gaggggctggccgacatgcaggaccagcgcatgtccgcgacgctgaacgaggacaacagc
ttctcggccagtgccgagagcgactatcagaacctgcggtcggaaatcgtcgtcctggtg
aactcgctgcacctgaacagcggccggatcgaggcgcttgtcgatcagctttacggcatc
aaccgccggatcgtcaccatcgacagcggcatggtcaagctggccgacgcggcccgcatc
aaccgccgcgagttcatcgacgcctatcgcggcagcgagctggacccgaactgggtggac
cgcatgtccgcgcaggccgggcgcggctggcaggcgctgttcgaccggtcgcgcgaccag
gtcgagcgtctgcgcggcgacatggccgaggtcggccagtatgtcggcgttgacatcgag
gagttccgccgcatcgtggcccaggtccagcgcggcgagaaggaggcccgtcaggccaag
aaggagatggtcgaggccaacctgcgcctggtcatctcgatcgccaagaaatacacgaac
cgcggcctgcagttcctggacctgatccaggagggcaacatcggcctgatgaaggccgtg
gacaagttcgaataccgccgcggctacaagttctcgacctatgcgacgtggtggatccgt
caggcgatcacccggtccatcgcggatcaggcgcgcacgatccgcatcccggtccacatg
atcgagacgatcaacaagctggtccgcaccggccgccagatgctgcacgagatcggccgc
gagcccacgcccgaggaactggccgagaagctgcaaatgccgctggagaaggtccgcaag
gtgatgaagatcgccaaggaaccgatcagcctcgagaccccgatcggggacgaggaggac
agccagcttggcgatttcatcgaggacaagaacgccgtcctaccgctggacagcgccatc
caggagaacctcaaggagaccacgacccgcgtcctggccagcctgacgccccgcgaggaa
cgtgtgctgcgcatgcgcttcggcatcggcatgaacaccgaccacaccctggaggaggtc
ggccagcagttcagcgtgacccgcgaacgaatccgccagatcgaggccaaggcgctgcgc
aagctgaaacatccgtcgcggagcagaaagctgcggtccttccttgaccagtga
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